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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=23)
PGPGPGFRGPAGPNGIPGPGPGP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6a0c-a1-m1-cB 23 23 1.0000 1.0000 1.0000 9.04e-07 6a0c-a1-m1-cB_6a0c-a1-m1-cA, 6a0c-a1-m1-cB_6a0c-a1-m1-cC
2 6a0c-a1-m1-cC 24 23 1.0000 0.9583 1.0000 1.08e-06 6a0c-a1-m1-cA_6a0c-a1-m1-cC, 6a0c-a1-m1-cB_6a0c-a1-m1-cC
3 6a0c-a1-m1-cA 24 23 1.0000 0.9583 1.0000 1.08e-06 6a0c-a1-m1-cA_6a0c-a1-m1-cC, 6a0c-a1-m1-cB_6a0c-a1-m1-cA
4 8hhk-a2-m1-cI 20 20 0.5652 0.6500 0.6500 4.0 8hhk-a2-m1-cG_8hhk-a2-m1-cI, 8hhk-a2-m1-cH_8hhk-a2-m1-cI
5 6r65-a2-m1-cB 623 16 0.3913 0.0144 0.5625 6.7 6r65-a2-m1-cA_6r65-a2-m1-cB
6 6r65-a2-m1-cA 611 16 0.3913 0.0147 0.5625 6.7 6r65-a2-m1-cA_6r65-a2-m1-cB

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Reference:
Jacob Schwartz et al.

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