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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=24)
PGPGPGIPGEKGPAGERGPGPGPG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6a0a-a1-m1-cC 24 24 1.0000 1.0000 1.0000 2.95e-07 6a0a-a1-m1-cA_6a0a-a1-m1-cC, 6a0a-a1-m1-cB_6a0a-a1-m1-cC
2 6a0a-a1-m1-cB 24 24 1.0000 1.0000 1.0000 2.95e-07 6a0a-a1-m1-cB_6a0a-a1-m1-cC
3 6a0a-a1-m1-cA 23 23 0.9583 1.0000 1.0000 7.29e-07 6a0a-a1-m1-cA_6a0a-a1-m1-cC
4 8hhk-a2-m1-cI 20 20 0.5417 0.6500 0.6500 1.3 8hhk-a2-m1-cG_8hhk-a2-m1-cI, 8hhk-a2-m1-cH_8hhk-a2-m1-cI
5 8hhk-a2-m1-cH 19 19 0.5000 0.6316 0.6316 3.5 8hhk-a2-m1-cG_8hhk-a2-m1-cH, 8hhk-a2-m1-cH_8hhk-a2-m1-cI
6 8hhk-a2-m1-cG 19 19 0.5000 0.6316 0.6316 3.5 8hhk-a2-m1-cG_8hhk-a2-m1-cH, 8hhk-a2-m1-cG_8hhk-a2-m1-cI
7 5mvi-a2-m1-cD 337 17 0.3750 0.0267 0.5294 6.8 5mvi-a2-m1-cC_5mvi-a2-m1-cD
8 5mvi-a2-m1-cC 332 17 0.3750 0.0271 0.5294 7.9 5mvi-a2-m1-cC_5mvi-a2-m1-cD
9 5mux-a3-m1-cE 472 17 0.3333 0.0169 0.4706 8.5 5mux-a3-m1-cF_5mux-a3-m1-cE
10 5mux-a3-m1-cF 468 17 0.3333 0.0171 0.4706 9.6 5mux-a3-m1-cF_5mux-a3-m1-cE

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Reference:
Jacob Schwartz et al.

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