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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=14)
PGPGPGPAGFGPGP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5eiv-a1-m1-cG 14 14 1.0000 1.0000 1.0000 0.11 5eiv-a1-m1-cG_5eiv-a1-m1-cF, 5eiv-a1-m1-cG_5eiv-a1-m1-cH
2 5eiv-a1-m1-cD 14 14 1.0000 1.0000 1.0000 0.11 5eiv-a1-m1-cD_5eiv-a1-m1-cC, 5eiv-a1-m1-cD_5eiv-a1-m1-cE
3 5eiv-a1-m1-cH 15 14 1.0000 0.9333 1.0000 0.11 5eiv-a1-m1-cF_5eiv-a1-m1-cH, 5eiv-a1-m1-cG_5eiv-a1-m1-cH
4 5eiv-a1-m1-cF 15 14 1.0000 0.9333 1.0000 0.11 5eiv-a1-m1-cF_5eiv-a1-m1-cH, 5eiv-a1-m1-cG_5eiv-a1-m1-cF
5 5eiv-a1-m1-cE 15 14 1.0000 0.9333 1.0000 0.11 5eiv-a1-m1-cD_5eiv-a1-m1-cE
6 5eiv-a1-m1-cC 15 14 1.0000 0.9333 1.0000 0.11 5eiv-a1-m1-cD_5eiv-a1-m1-cC
7 5cjb-a1-m1-cD 17 14 1.0000 0.8235 1.0000 0.16 5cjb-a1-m1-cB_5cjb-a1-m1-cD, 5cjb-a1-m1-cC_5cjb-a1-m1-cD
8 5cjb-a1-m1-cB 17 14 1.0000 0.8235 1.0000 0.16 5cjb-a1-m1-cB_5cjb-a1-m1-cD
9 5cjb-a1-m1-cC 16 13 0.9286 0.8125 1.0000 0.53 5cjb-a1-m1-cC_5cjb-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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