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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=21)
PGPGPGPGEKGPGPGPGPGPG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1qsu-a1-m1-cB 21 21 1.0000 1.0000 1.0000 4.19e-04 1qsu-a1-m1-cC_1qsu-a1-m1-cB
2 1qsu-a1-m1-cA 21 21 1.0000 1.0000 1.0000 4.19e-04 1qsu-a1-m1-cC_1qsu-a1-m1-cA
3 1qsu-a1-m1-cC 20 20 0.9524 1.0000 1.0000 0.001 1qsu-a1-m1-cC_1qsu-a1-m1-cA, 1qsu-a1-m1-cC_1qsu-a1-m1-cB
4 1q7d-a1-m1-cC 15 15 0.6190 0.8667 0.8667 2.0 1q7d-a1-m1-cA_1q7d-a1-m1-cC, 1q7d-a1-m1-cB_1q7d-a1-m1-cC
5 1q7d-a1-m1-cB 15 15 0.6190 0.8667 0.8667 2.0 1q7d-a1-m1-cA_1q7d-a1-m1-cB, 1q7d-a1-m1-cB_1q7d-a1-m1-cC
6 1q7d-a1-m1-cA 15 15 0.6190 0.8667 0.8667 2.0 1q7d-a1-m1-cA_1q7d-a1-m1-cB, 1q7d-a1-m1-cA_1q7d-a1-m1-cC
7 1dzi-a1-m1-cD 15 15 0.6190 0.8667 0.8667 2.0 1dzi-a1-m1-cB_1dzi-a1-m1-cD, 1dzi-a1-m1-cC_1dzi-a1-m1-cD
8 1dzi-a1-m1-cC 15 15 0.6190 0.8667 0.8667 2.0 1dzi-a1-m1-cB_1dzi-a1-m1-cC, 1dzi-a1-m1-cC_1dzi-a1-m1-cD
9 1dzi-a1-m1-cB 15 15 0.6190 0.8667 0.8667 2.0 1dzi-a1-m1-cB_1dzi-a1-m1-cC, 1dzi-a1-m1-cB_1dzi-a1-m1-cD
10 2m32-a1-m1-cD 15 15 0.6190 0.8667 0.8667 3.6 2m32-a1-m1-cB_2m32-a1-m1-cD, 2m32-a1-m1-cC_2m32-a1-m1-cD
11 2m32-a1-m1-cC 15 15 0.6190 0.8667 0.8667 3.6 2m32-a1-m1-cB_2m32-a1-m1-cC, 2m32-a1-m1-cC_2m32-a1-m1-cD
12 2m32-a1-m1-cB 15 15 0.6190 0.8667 0.8667 3.6 2m32-a1-m1-cB_2m32-a1-m1-cC, 2m32-a1-m1-cB_2m32-a1-m1-cD
13 1oc2-a1-m1-cB 346 10 0.3810 0.0231 0.8000 8.0 1oc2-a1-m1-cA_1oc2-a1-m1-cB
14 1oc2-a1-m1-cA 346 10 0.3810 0.0231 0.8000 8.1 1oc2-a1-m1-cA_1oc2-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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