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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=28)
PGPGPGPGLKGHRGFTGLQGPGPGPGPG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6hg7-a1-m1-cC 28 28 1.0000 1.0000 1.0000 2.43e-10 6hg7-a1-m1-cB_6hg7-a1-m1-cC
2 6hg7-a1-m1-cB 28 28 1.0000 1.0000 1.0000 2.43e-10 6hg7-a1-m1-cA_6hg7-a1-m1-cB, 6hg7-a1-m1-cB_6hg7-a1-m1-cC
3 6hg7-a1-m1-cA 28 28 1.0000 1.0000 1.0000 2.43e-10 6hg7-a1-m1-cA_6hg7-a1-m1-cB
4 6los-a1-m2-cG 21 22 0.6786 0.9048 0.8636 0.006 6los-a1-m2-cH_6los-a1-m2-cG
5 6los-a1-m2-cH 19 20 0.6071 0.8947 0.8500 0.076 6los-a1-m2-cH_6los-a1-m2-cG
6 3hr2-a1-m9-cC 939 16 0.4643 0.0138 0.8125 0.15 3hr2-a1-m9-cA_3hr2-a1-m9-cC
7 3hr2-a1-m9-cA 939 16 0.4643 0.0138 0.8125 0.15 3hr2-a1-m9-cA_3hr2-a1-m9-cC
8 3hqv-a1-m9-cA 939 16 0.4643 0.0138 0.8125 0.15 3hqv-a1-m8-cC_3hqv-a1-m9-cA
9 3hqv-a1-m8-cC 939 16 0.4643 0.0138 0.8125 0.15 3hqv-a1-m8-cC_3hqv-a1-m9-cA
10 3hqv-a1-m3-cA 939 16 0.4643 0.0138 0.8125 0.15 3hqv-a1-m1-cA_3hqv-a1-m3-cA
11 3hqv-a1-m1-cA 939 16 0.4643 0.0138 0.8125 0.15 3hqv-a1-m1-cA_3hqv-a1-m3-cA
12 7cwk-a1-m1-cB 21 13 0.3571 0.4762 0.7692 6.1 7cwk-a1-m1-cC_7cwk-a1-m1-cB
13 7cwk-a1-m1-cA 21 13 0.3571 0.4762 0.7692 6.1 7cwk-a1-m1-cC_7cwk-a1-m1-cA
14 8hhk-a2-m1-cI 20 20 0.4286 0.6000 0.6000 9.7 8hhk-a2-m1-cG_8hhk-a2-m1-cI, 8hhk-a2-m1-cH_8hhk-a2-m1-cI

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Reference:
Jacob Schwartz et al.

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