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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=19)
PGPGPGPGPAPGPGPGPGP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1cag-a1-m1-cC 19 19 1.0000 1.0000 1.0000 0.011 1cag-a1-m1-cA_1cag-a1-m1-cC, 1cag-a1-m1-cC_1cag-a1-m1-cB
2 1cag-a1-m1-cA 19 19 1.0000 1.0000 1.0000 0.011 1cag-a1-m1-cA_1cag-a1-m1-cC
3 1cag-a1-m1-cB 20 19 1.0000 0.9500 1.0000 0.013 1cag-a1-m1-cC_1cag-a1-m1-cB
4 1cag-a1-m1-cB 20 18 0.8421 0.8000 0.8889 0.74 1cag-a1-m1-cC_1cag-a1-m1-cB
5 4z1r-a1-m1-cB 18 18 0.9474 1.0000 1.0000 0.030 4z1r-a1-m1-cC_4z1r-a1-m1-cB
6 4z1r-a1-m1-cA 18 18 0.9474 1.0000 1.0000 0.030 4z1r-a1-m1-cC_4z1r-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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