Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=16)
PGPGPGPRGPGPGPGP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3wn8-a1-m1-cB 16 16 1.0000 1.0000 1.0000 0.058 3wn8-a1-m1-cB_3wn8-a1-m1-cC
2 3wn8-a1-m1-cC 17 16 1.0000 0.9412 1.0000 0.066 3wn8-a1-m1-cA_3wn8-a1-m1-cC, 3wn8-a1-m1-cB_3wn8-a1-m1-cC
3 3wn8-a1-m1-cA 17 16 1.0000 0.9412 1.0000 0.066 3wn8-a1-m1-cA_3wn8-a1-m1-cC
4 7m6a-a1-m1-cI 4306 10 0.4375 0.0016 0.7000 9.3 7m6a-a1-m1-cG_7m6a-a1-m1-cI
5 7m6a-a1-m1-cG 4306 10 0.4375 0.0016 0.7000 9.3 7m6a-a1-m1-cG_7m6a-a1-m1-cI
6 7umz-a1-m1-cD 3927 10 0.4375 0.0018 0.7000 9.3 7umz-a1-m1-cC_7umz-a1-m1-cD
7 7umz-a1-m1-cC 3927 10 0.4375 0.0018 0.7000 9.3 7umz-a1-m1-cC_7umz-a1-m1-cD
8 2f6a-a3-m2-cI 22 19 1.0000 0.7273 0.8421 9.5 2f6a-a3-m2-cH_2f6a-a3-m2-cI, 2f6a-a3-m2-cJ_2f6a-a3-m2-cI
9 2f6a-a3-m2-cH 22 19 1.0000 0.7273 0.8421 9.5 2f6a-a3-m2-cH_2f6a-a3-m2-cI, 2f6a-a3-m2-cJ_2f6a-a3-m2-cH
10 7m6l-a1-m1-cI 4299 10 0.4375 0.0016 0.7000 9.6 7m6l-a1-m1-cG_7m6l-a1-m1-cI
11 7m6l-a1-m1-cG 4299 10 0.4375 0.0016 0.7000 9.6 7m6l-a1-m1-cG_7m6l-a1-m1-cI
12 7t64-a1-m1-cD 4247 10 0.4375 0.0016 0.7000 10.0 7t64-a1-m1-cC_7t64-a1-m1-cD
13 7t64-a1-m1-cC 4247 10 0.4375 0.0016 0.7000 10.0 7t64-a1-m1-cC_7t64-a1-m1-cD
14 7k0t-a1-m1-cD 4105 10 0.4375 0.0017 0.7000 10.0 7k0t-a1-m1-cC_7k0t-a1-m1-cD
15 7k0t-a1-m1-cC 4105 10 0.4375 0.0017 0.7000 10.0 7k0t-a1-m1-cC_7k0t-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600