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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=21)
PGPGPGQRGERGFPGPGPGPG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7cwk-a1-m1-cB 21 21 1.0000 1.0000 1.0000 5.25e-06 7cwk-a1-m1-cC_7cwk-a1-m1-cB
2 7cwk-a1-m1-cA 21 21 1.0000 1.0000 1.0000 5.25e-06 7cwk-a1-m1-cC_7cwk-a1-m1-cA
3 7cwk-a1-m1-cC 20 20 0.9524 1.0000 1.0000 1.35e-05 7cwk-a1-m1-cC_7cwk-a1-m1-cA, 7cwk-a1-m1-cC_7cwk-a1-m1-cB
4 6los-a1-m2-cG 21 20 0.7143 0.7143 0.7500 0.13 6los-a1-m2-cH_6los-a1-m2-cG
5 6los-a1-m2-cH 19 19 0.6667 0.7368 0.7368 0.27 6los-a1-m2-cH_6los-a1-m2-cG
6 4rct-a1-m1-cB 345 15 0.3810 0.0232 0.5333 7.4 4rct-a1-m1-cA_4rct-a1-m1-cB
7 4rct-a1-m1-cA 345 15 0.3810 0.0232 0.5333 7.4 4rct-a1-m1-cA_4rct-a1-m1-cB
8 6le1-a1-m2-cA 87 18 0.4762 0.1149 0.5556 9.5 6le1-a1-m1-cA_6le1-a1-m2-cA
9 6le1-a1-m1-cA 87 18 0.4762 0.1149 0.5556 9.5 6le1-a1-m1-cA_6le1-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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