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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=19)
PGPGPRGPGPGVGPGPGGP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6w46-a1-m1-cC 19 19 1.0000 1.0000 1.0000 0.002 6w46-a1-m1-cA_6w46-a1-m1-cC, 6w46-a1-m1-cB_6w46-a1-m1-cC
2 6w46-a1-m1-cB 19 19 1.0000 1.0000 1.0000 0.002 6w46-a1-m1-cB_6w46-a1-m1-cC
3 6w46-a1-m1-cA 19 19 1.0000 1.0000 1.0000 0.002 6w46-a1-m1-cA_6w46-a1-m1-cC
4 7m6a-a1-m1-cI 4306 11 0.3684 0.0016 0.6364 7.0 7m6a-a1-m1-cG_7m6a-a1-m1-cI
5 7m6a-a1-m1-cG 4306 11 0.3684 0.0016 0.6364 7.0 7m6a-a1-m1-cG_7m6a-a1-m1-cI
6 7m6l-a1-m1-cI 4299 11 0.3684 0.0016 0.6364 7.0 7m6l-a1-m1-cG_7m6l-a1-m1-cI
7 7m6l-a1-m1-cG 4299 11 0.3684 0.0016 0.6364 7.0 7m6l-a1-m1-cG_7m6l-a1-m1-cI
8 7t64-a1-m1-cD 4247 11 0.3684 0.0016 0.6364 7.2 7t64-a1-m1-cC_7t64-a1-m1-cD
9 7t64-a1-m1-cC 4247 11 0.3684 0.0016 0.6364 7.2 7t64-a1-m1-cC_7t64-a1-m1-cD
10 7umz-a1-m1-cD 3927 11 0.3684 0.0018 0.6364 7.3 7umz-a1-m1-cC_7umz-a1-m1-cD
11 7umz-a1-m1-cC 3927 11 0.3684 0.0018 0.6364 7.3 7umz-a1-m1-cC_7umz-a1-m1-cD
12 6wot-a1-m1-cD 4197 11 0.3684 0.0017 0.6364 7.5 6wot-a1-m1-cB_6wot-a1-m1-cD, 6wot-a1-m1-cC_6wot-a1-m1-cD
13 6wot-a1-m1-cC 4197 11 0.3684 0.0017 0.6364 7.5 6wot-a1-m1-cC_6wot-a1-m1-cD
14 6wot-a1-m1-cB 4197 11 0.3684 0.0017 0.6364 7.5 6wot-a1-m1-cB_6wot-a1-m1-cD
15 7k0t-a1-m1-cD 4105 11 0.3684 0.0017 0.6364 7.5 7k0t-a1-m1-cC_7k0t-a1-m1-cD
16 7k0t-a1-m1-cC 4105 11 0.3684 0.0017 0.6364 7.5 7k0t-a1-m1-cC_7k0t-a1-m1-cD
17 7tdj-a1-m1-cD 4133 11 0.3684 0.0017 0.6364 8.3 7tdj-a1-m1-cC_7tdj-a1-m1-cD
18 7tdj-a1-m1-cC 4133 11 0.3684 0.0017 0.6364 8.3 7tdj-a1-m1-cC_7tdj-a1-m1-cD
19 6foo-a1-m1-cD 4168 11 0.3684 0.0017 0.6364 8.8 6foo-a1-m1-cC_6foo-a1-m1-cD
20 6foo-a1-m1-cC 4168 11 0.3684 0.0017 0.6364 8.8 6foo-a1-m1-cC_6foo-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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