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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
PGTPEVKVASSEDVDLPCTAPWDPQVPYTVSWVKLLNERPYSLKIRNTTSSNSGTYRCTL
QDPDGQRNLSGKVILRVTGS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5mj0-a1-m1-cA 80 80 1.0000 1.0000 1.0000 1.31e-54 5mj0-a1-m1-cB_5mj0-a1-m1-cA
2 5mj0-a1-m1-cB 79 79 0.9750 0.9873 0.9873 5.01e-51 5mj0-a1-m1-cB_5mj0-a1-m1-cA
3 4f8q-a1-m2-cA 208 23 0.1500 0.0577 0.5217 0.025 4f8q-a1-m1-cA_4f8q-a1-m2-cA
4 4f8q-a1-m1-cA 208 23 0.1500 0.0577 0.5217 0.025 4f8q-a1-m1-cA_4f8q-a1-m2-cA
5 6u6t-a1-m1-cB 271 55 0.2125 0.0627 0.3091 0.027 6u6t-a1-m1-cA_6u6t-a1-m1-cB
6 6u6t-a1-m1-cA 268 55 0.2125 0.0634 0.3091 0.028 6u6t-a1-m1-cA_6u6t-a1-m1-cB
7 4f80-a1-m2-cA 209 23 0.1500 0.0574 0.5217 0.030 4f80-a1-m1-cA_4f80-a1-m2-cA
8 4f80-a1-m1-cA 209 23 0.1500 0.0574 0.5217 0.030 4f80-a1-m1-cA_4f80-a1-m2-cA
9 2iep-a3-m4-cB 187 70 0.2750 0.1176 0.3143 0.053 2iep-a3-m1-cA_2iep-a3-m4-cB, 2iep-a3-m1-cB_2iep-a3-m4-cB, 2iep-a3-m4-cA_2iep-a3-m4-cB
10 2iep-a3-m4-cA 187 70 0.2750 0.1176 0.3143 0.053 2iep-a3-m1-cA_2iep-a3-m4-cA, 2iep-a3-m4-cA_2iep-a3-m4-cB
11 2iep-a3-m1-cB 187 70 0.2750 0.1176 0.3143 0.053 2iep-a3-m1-cB_2iep-a3-m4-cB
12 2iep-a3-m1-cA 187 70 0.2750 0.1176 0.3143 0.053 2iep-a3-m1-cA_2iep-a3-m4-cA, 2iep-a3-m1-cA_2iep-a3-m4-cB
13 2iep-a2-m3-cA 187 70 0.2750 0.1176 0.3143 0.053 2iep-a2-m1-cB_2iep-a2-m3-cA
14 2iep-a2-m1-cB 187 70 0.2750 0.1176 0.3143 0.053 2iep-a2-m1-cB_2iep-a2-m3-cA
15 6igt-a1-m1-cD 116 37 0.1500 0.1034 0.3243 0.064 6igt-a1-m1-cC_6igt-a1-m1-cD, 6igt-a1-m1-cD_6igt-a1-m1-cA
16 6igt-a1-m1-cC 116 37 0.1500 0.1034 0.3243 0.064 6igt-a1-m1-cC_6igt-a1-m1-cD
17 1cs6-a1-m2-cA 382 72 0.2750 0.0576 0.3056 0.073 1cs6-a1-m1-cA_1cs6-a1-m2-cA
18 1cs6-a1-m1-cA 382 72 0.2750 0.0576 0.3056 0.073 1cs6-a1-m1-cA_1cs6-a1-m2-cA
19 6igo-a1-m1-cC 122 34 0.1375 0.0902 0.3235 0.20 6igo-a1-m1-cA_6igo-a1-m1-cC
20 6igo-a1-m1-cA 120 34 0.1375 0.0917 0.3235 0.21 6igo-a1-m1-cA_6igo-a1-m1-cC
21 6igt-a1-m1-cA 117 34 0.1375 0.0940 0.3235 0.23 6igt-a1-m1-cD_6igt-a1-m1-cA
22 7nmu-a1-m1-cBBB 178 59 0.2750 0.1236 0.3729 0.59 7nmu-a1-m1-cAAA_7nmu-a1-m1-cBBB
23 7ol2-a1-m1-cB 568 64 0.2625 0.0370 0.3281 0.59 7ol2-a1-m1-cA_7ol2-a1-m1-cB
24 7ol2-a1-m1-cB 568 88 0.2375 0.0335 0.2159 0.76 7ol2-a1-m1-cA_7ol2-a1-m1-cB
25 7ol2-a1-m1-cA 568 64 0.2625 0.0370 0.3281 0.59 7ol2-a1-m1-cA_7ol2-a1-m1-cB
26 7ol2-a1-m1-cA 568 88 0.2375 0.0335 0.2159 0.76 7ol2-a1-m1-cA_7ol2-a1-m1-cB
27 7nmu-a1-m1-cAAA 174 59 0.2750 0.1264 0.3729 0.63 7nmu-a1-m1-cAAA_7nmu-a1-m1-cBBB
28 2vaj-a1-m2-cA 93 76 0.2375 0.2043 0.2500 1.4 2vaj-a1-m1-cA_2vaj-a1-m2-cA
29 2vaj-a1-m1-cA 93 76 0.2375 0.2043 0.2500 1.4 2vaj-a1-m1-cA_2vaj-a1-m2-cA
30 3p2t-a2-m2-cA 194 61 0.2375 0.0979 0.3115 2.3 3p2t-a2-m1-cA_3p2t-a2-m2-cA
31 3p2t-a2-m1-cA 194 61 0.2375 0.0979 0.3115 2.3 3p2t-a2-m1-cA_3p2t-a2-m2-cA
32 4zb7-a2-m1-cC 149 25 0.1375 0.0738 0.4400 2.7 4zb7-a2-m1-cC_4zb7-a2-m1-cD
33 5xnp-a1-m1-cB 361 75 0.2500 0.0554 0.2667 3.8 5xnp-a1-m1-cA_5xnp-a1-m1-cB
34 5xnp-a1-m1-cA 361 75 0.2500 0.0554 0.2667 3.8 5xnp-a1-m1-cA_5xnp-a1-m1-cB
35 1h5b-a2-m1-cD 111 29 0.1625 0.1171 0.4483 3.8 1h5b-a2-m1-cD_1h5b-a2-m1-cC
36 1h5b-a2-m1-cC 113 29 0.1625 0.1150 0.4483 4.1 1h5b-a2-m1-cD_1h5b-a2-m1-cC
37 6isb-a1-m1-cB 218 36 0.1625 0.0596 0.3611 4.4 6isb-a1-m1-cB_6isb-a1-m1-cA, 6isb-a1-m1-cC_6isb-a1-m1-cB
38 6isb-a1-m1-cA 221 36 0.1625 0.0588 0.3611 4.8 6isb-a1-m1-cB_6isb-a1-m1-cA, 6isb-a1-m1-cC_6isb-a1-m1-cA
39 6o3o-a1-m3-cA 218 36 0.1625 0.0596 0.3611 4.9 6o3o-a1-m1-cB_6o3o-a1-m3-cA
40 2v5y-a1-m2-cA 564 35 0.1375 0.0195 0.3143 6.1 2v5y-a1-m1-cA_2v5y-a1-m2-cA
41 2v5y-a1-m1-cA 564 35 0.1375 0.0195 0.3143 6.1 2v5y-a1-m1-cA_2v5y-a1-m2-cA
42 2yz1-a3-m1-cB 114 22 0.1125 0.0789 0.4091 6.4 2yz1-a3-m1-cA_2yz1-a3-m1-cB
43 2yz1-a3-m1-cA 114 22 0.1125 0.0789 0.4091 6.4 2yz1-a3-m1-cA_2yz1-a3-m1-cB
44 4x5l-a2-m3-cB 96 30 0.1250 0.1042 0.3333 7.4 4x5l-a2-m1-cB_4x5l-a2-m3-cB
45 4x5l-a2-m1-cB 96 30 0.1250 0.1042 0.3333 7.4 4x5l-a2-m1-cB_4x5l-a2-m3-cB
46 5noi-a1-m2-cA 198 74 0.3000 0.1212 0.3243 7.5 5noi-a1-m1-cA_5noi-a1-m2-cA
47 5noi-a1-m1-cA 198 74 0.3000 0.1212 0.3243 7.5 5noi-a1-m1-cA_5noi-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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