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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIA
PQMEALIKKPGYSMNA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1gyy-a1-m1-cB 76 76 1.0000 1.0000 1.0000 4.23e-51 1gyy-a1-m1-cA_1gyy-a1-m1-cB
2 1gyy-a1-m1-cA 76 76 1.0000 1.0000 1.0000 4.23e-51 1gyy-a1-m1-cA_1gyy-a1-m1-cB
3 5uif-a1-m1-cC 112 50 0.1579 0.1071 0.2400 0.95 5uif-a1-m1-cB_5uif-a1-m1-cC
4 5uif-a1-m1-cB 112 50 0.1579 0.1071 0.2400 0.95 5uif-a1-m1-cB_5uif-a1-m1-cC
5 6k3c-a1-m1-cB 351 26 0.1447 0.0313 0.4231 2.2 6k3c-a1-m1-cB_6k3c-a1-m1-cA
6 6k3c-a1-m1-cA 388 26 0.1447 0.0284 0.4231 2.3 6k3c-a1-m1-cB_6k3c-a1-m1-cA
7 5xav-a1-m1-cA 376 26 0.1447 0.0293 0.4231 2.6 5xav-a1-m1-cA_5xav-a1-m1-cB
8 5xav-a1-m1-cB 378 26 0.1447 0.0291 0.4231 2.8 5xav-a1-m1-cA_5xav-a1-m1-cB
9 4p7s-a2-m2-cA 104 38 0.1579 0.1154 0.3158 7.0 4p7s-a2-m1-cA_4p7s-a2-m2-cA
10 4p7s-a2-m1-cA 104 38 0.1579 0.1154 0.3158 7.0 4p7s-a2-m1-cA_4p7s-a2-m2-cA
11 4q05-a1-m1-cB 327 64 0.2368 0.0550 0.2812 7.6 4q05-a1-m1-cA_4q05-a1-m1-cB
12 4q05-a1-m1-cA 327 64 0.2368 0.0550 0.2812 7.6 4q05-a1-m1-cA_4q05-a1-m1-cB
13 4fdx-a1-m3-cA 61 51 0.1711 0.2131 0.2549 8.4 4fdx-a1-m3-cA_4fdx-a1-m3-cB
14 4fdx-a1-m3-cB 64 51 0.1711 0.2031 0.2549 9.2 4fdx-a1-m2-cB_4fdx-a1-m3-cB, 4fdx-a1-m3-cA_4fdx-a1-m3-cB
15 4fdx-a1-m2-cB 64 51 0.1711 0.2031 0.2549 9.2 4fdx-a1-m2-cB_4fdx-a1-m3-cB

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Reference:
Jacob Schwartz et al.

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