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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
PHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVE
AYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4jjn-a1-m1-cA 98 98 1.0000 1.0000 1.0000 6.53e-67 4jjn-a1-m1-cE_4jjn-a1-m1-cA
2 7z0o-a1-m1-cC 97 96 0.9796 0.9897 1.0000 1.53e-65 7z0o-a1-m1-cA_7z0o-a1-m1-cC
3 4jjn-a1-m1-cE 96 96 0.9796 1.0000 1.0000 4.74e-65 4jjn-a1-m1-cE_4jjn-a1-m1-cA
4 7z0o-a1-m1-cA 94 94 0.9592 1.0000 1.0000 1.27e-63 7z0o-a1-m1-cA_7z0o-a1-m1-cC
5 8f86-a1-m1-cA 107 96 0.8673 0.7944 0.8854 3.94e-58 8f86-a1-m1-cE_8f86-a1-m1-cA
6 8f86-a1-m1-cE 95 95 0.8571 0.8842 0.8842 7.45e-57 8f86-a1-m1-cE_8f86-a1-m1-cA
7 5ay8-a1-m1-cE 96 96 0.7653 0.7812 0.7812 2.84e-51 5ay8-a1-m1-cE_5ay8-a1-m1-cA
8 5ay8-a1-m1-cA 97 96 0.7653 0.7732 0.7812 3.19e-51 5ay8-a1-m1-cE_5ay8-a1-m1-cA
9 5zbx-a1-m1-cA 95 96 0.7347 0.7579 0.7500 4.02e-47 5zbx-a1-m1-cA_5zbx-a1-m1-cE
10 5zbx-a1-m1-cE 101 98 0.7245 0.7030 0.7245 4.72e-46 5zbx-a1-m1-cA_5zbx-a1-m1-cE
11 6kxv-a1-m1-cE 95 95 0.7041 0.7263 0.7263 7.70e-45 6kxv-a1-m1-cA_6kxv-a1-m1-cE
12 6kxv-a1-m1-cA 94 94 0.6939 0.7234 0.7234 3.67e-44 6kxv-a1-m1-cA_6kxv-a1-m1-cE
13 7y7i-a1-m1-cE 97 97 0.6327 0.6392 0.6392 5.05e-39 7y7i-a1-m1-cE_7y7i-a1-m1-cA
14 7y7i-a1-m1-cA 102 97 0.6327 0.6078 0.6392 6.39e-39 7y7i-a1-m1-cE_7y7i-a1-m1-cA
15 6uph-a1-m1-cE 97 94 0.5918 0.5979 0.6170 3.14e-36 6uph-a1-m1-cA_6uph-a1-m1-cE
16 6uph-a1-m1-cA 93 91 0.5816 0.6129 0.6264 3.67e-35 6uph-a1-m1-cA_6uph-a1-m1-cE
17 2yfw-a2-m1-cE 88 87 0.5510 0.6136 0.6207 5.92e-33 2yfw-a2-m1-cC_2yfw-a2-m1-cE
18 7d69-a1-m1-cE 99 95 0.5714 0.5657 0.5895 2.06e-32 7d69-a1-m1-cA_7d69-a1-m1-cE
19 7d69-a1-m1-cA 90 87 0.5306 0.5778 0.5977 3.11e-29 7d69-a1-m1-cA_7d69-a1-m1-cE
20 2yfw-a2-m1-cC 71 76 0.4796 0.6620 0.6184 1.36e-25 2yfw-a2-m1-cC_2yfw-a2-m1-cE
21 6xwt-a1-m1-cC 74 68 0.2959 0.3919 0.4265 3.05e-10 6xwt-a1-m1-cA_6xwt-a1-m1-cC
22 6xwt-a1-m1-cA 74 68 0.2959 0.3919 0.4265 3.05e-10 6xwt-a1-m1-cA_6xwt-a1-m1-cC
23 7lv9-a1-m1-cE 102 79 0.2551 0.2451 0.3165 4.58e-05 7lv9-a1-m1-cA_7lv9-a1-m1-cE
24 7lv9-a1-m1-cA 102 79 0.2551 0.2451 0.3165 4.58e-05 7lv9-a1-m1-cA_7lv9-a1-m1-cE
25 1ku5-a1-m1-cB 66 62 0.2041 0.3030 0.3226 0.26 1ku5-a1-m1-cA_1ku5-a1-m1-cB
26 1ku5-a1-m1-cA 66 62 0.2041 0.3030 0.3226 0.26 1ku5-a1-m1-cA_1ku5-a1-m1-cB
27 7da0-a1-m2-cB 95 76 0.2653 0.2737 0.3421 0.51 7da0-a1-m1-cB_7da0-a1-m2-cB
28 7da0-a1-m1-cB 95 76 0.2653 0.2737 0.3421 0.51 7da0-a1-m1-cB_7da0-a1-m2-cB
29 1taf-a2-m5-cA 68 44 0.1327 0.1912 0.2955 0.52 1taf-a2-m4-cA_1taf-a2-m5-cA
30 1taf-a2-m4-cA 68 44 0.1327 0.1912 0.2955 0.52 1taf-a2-m4-cA_1taf-a2-m5-cA
31 3g1u-a1-m1-cB 412 36 0.1633 0.0388 0.4444 4.8 3g1u-a1-m1-cB_3g1u-a1-m1-cD
32 3g1u-a1-m1-cA 412 36 0.1633 0.0388 0.4444 4.8 3g1u-a1-m1-cA_3g1u-a1-m1-cD
33 3g1u-a1-m1-cD 418 36 0.1633 0.0383 0.4444 4.8 3g1u-a1-m1-cA_3g1u-a1-m1-cD, 3g1u-a1-m1-cB_3g1u-a1-m1-cD, 3g1u-a1-m1-cD_3g1u-a1-m1-cC
34 3g1u-a1-m1-cC 424 36 0.1633 0.0377 0.4444 4.8 3g1u-a1-m1-cD_3g1u-a1-m1-cC
35 1b67-a1-m1-cB 65 18 0.1020 0.1538 0.5556 7.1 1b67-a1-m1-cB_1b67-a1-m1-cA
36 1b67-a1-m1-cA 68 18 0.1020 0.1471 0.5556 7.3 1b67-a1-m1-cB_1b67-a1-m1-cA
37 1wsr-a2-m2-cB 371 26 0.1122 0.0296 0.4231 7.5 1wsr-a2-m1-cA_1wsr-a2-m2-cB
38 1wsr-a2-m1-cA 371 26 0.1122 0.0296 0.4231 7.5 1wsr-a2-m1-cA_1wsr-a2-m2-cB
39 1wsr-a1-m1-cB 371 26 0.1122 0.0296 0.4231 7.5 1wsr-a1-m1-cA_1wsr-a1-m1-cB
40 1wsr-a1-m1-cA 371 26 0.1122 0.0296 0.4231 7.5 1wsr-a1-m1-cA_1wsr-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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