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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREICQDFTDFNWQAQALLALQEAAEA
FLVHLFEDAYLLTLHAKRVTIMPKDIQLARRIRGE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5zbx-a1-m1-cA 95 95 1.0000 1.0000 1.0000 4.56e-66 5zbx-a1-m1-cA_5zbx-a1-m1-cE
2 5zbx-a1-m1-cE 101 98 1.0000 0.9406 0.9694 5.07e-64 5zbx-a1-m1-cA_5zbx-a1-m1-cE
3 8f86-a1-m1-cA 107 95 0.8211 0.7290 0.8211 8.93e-52 8f86-a1-m1-cE_8f86-a1-m1-cA
4 7y7i-a1-m1-cE 97 97 0.8105 0.7938 0.7938 2.17e-50 7y7i-a1-m1-cE_7y7i-a1-m1-cA
5 8f86-a1-m1-cE 95 94 0.8105 0.8105 0.8191 2.44e-50 8f86-a1-m1-cE_8f86-a1-m1-cA
6 7y7i-a1-m1-cA 102 97 0.8105 0.7549 0.7938 2.68e-50 7y7i-a1-m1-cE_7y7i-a1-m1-cA
7 4jjn-a1-m1-cA 98 96 0.7579 0.7347 0.7500 3.90e-47 4jjn-a1-m1-cE_4jjn-a1-m1-cA
8 7z0o-a1-m1-cC 97 96 0.7579 0.7423 0.7500 3.91e-47 7z0o-a1-m1-cA_7z0o-a1-m1-cC
9 4jjn-a1-m1-cE 96 95 0.7474 0.7396 0.7474 5.28e-46 4jjn-a1-m1-cE_4jjn-a1-m1-cA
10 7z0o-a1-m1-cA 94 94 0.7368 0.7447 0.7447 2.94e-45 7z0o-a1-m1-cA_7z0o-a1-m1-cC
11 5ay8-a1-m1-cE 96 96 0.6947 0.6875 0.6875 4.59e-43 5ay8-a1-m1-cE_5ay8-a1-m1-cA
12 5ay8-a1-m1-cA 97 96 0.6947 0.6804 0.6875 5.28e-43 5ay8-a1-m1-cE_5ay8-a1-m1-cA
13 6uph-a1-m1-cE 97 94 0.6000 0.5876 0.6064 7.56e-36 6uph-a1-m1-cA_6uph-a1-m1-cE
14 6uph-a1-m1-cA 93 91 0.5895 0.6022 0.6154 1.22e-34 6uph-a1-m1-cA_6uph-a1-m1-cE
15 2yfw-a2-m1-cE 88 86 0.5684 0.6136 0.6279 1.68e-34 2yfw-a2-m1-cC_2yfw-a2-m1-cE
16 6kxv-a1-m1-cA 94 94 0.5895 0.5957 0.5957 6.76e-34 6kxv-a1-m1-cA_6kxv-a1-m1-cE
17 6kxv-a1-m1-cE 95 94 0.5895 0.5895 0.5957 7.52e-34 6kxv-a1-m1-cA_6kxv-a1-m1-cE
18 7d69-a1-m1-cE 99 91 0.5053 0.4848 0.5275 2.94e-27 7d69-a1-m1-cA_7d69-a1-m1-cE
19 2yfw-a2-m1-cC 71 74 0.4632 0.6197 0.5946 7.87e-25 2yfw-a2-m1-cC_2yfw-a2-m1-cE
20 7d69-a1-m1-cA 90 83 0.4737 0.5000 0.5422 2.49e-24 7d69-a1-m1-cA_7d69-a1-m1-cE
21 6xwt-a1-m1-cC 74 68 0.3158 0.4054 0.4412 5.43e-11 6xwt-a1-m1-cA_6xwt-a1-m1-cC
22 6xwt-a1-m1-cA 74 68 0.3158 0.4054 0.4412 5.43e-11 6xwt-a1-m1-cA_6xwt-a1-m1-cC
23 7lv9-a1-m1-cE 102 79 0.2842 0.2647 0.3418 3.78e-06 7lv9-a1-m1-cA_7lv9-a1-m1-cE
24 7lv9-a1-m1-cA 102 79 0.2842 0.2647 0.3418 3.78e-06 7lv9-a1-m1-cA_7lv9-a1-m1-cE
25 1b67-a1-m1-cB 65 64 0.1895 0.2769 0.2812 0.35 1b67-a1-m1-cB_1b67-a1-m1-cA
26 1b67-a1-m1-cA 68 64 0.1895 0.2647 0.2812 0.37 1b67-a1-m1-cB_1b67-a1-m1-cA
27 2q16-a1-m1-cA 195 52 0.2000 0.0974 0.3654 0.55 2q16-a1-m1-cB_2q16-a1-m1-cA
28 2q16-a1-m1-cB 192 52 0.2000 0.0990 0.3654 0.57 2q16-a1-m1-cB_2q16-a1-m1-cA
29 1wsr-a2-m2-cB 371 26 0.1263 0.0323 0.4615 1.4 1wsr-a2-m1-cA_1wsr-a2-m2-cB
30 1wsr-a2-m1-cA 371 26 0.1263 0.0323 0.4615 1.4 1wsr-a2-m1-cA_1wsr-a2-m2-cB
31 1wsr-a1-m1-cB 371 26 0.1263 0.0323 0.4615 1.4 1wsr-a1-m1-cA_1wsr-a1-m1-cB
32 1wsr-a1-m1-cA 371 26 0.1263 0.0323 0.4615 1.4 1wsr-a1-m1-cA_1wsr-a1-m1-cB
33 1h94-a1-m2-cA 485 23 0.1158 0.0227 0.4783 2.4 1h94-a1-m1-cA_1h94-a1-m2-cA
34 1h94-a1-m1-cA 485 23 0.1158 0.0227 0.4783 2.4 1h94-a1-m1-cA_1h94-a1-m2-cA
35 1j93-a1-m2-cA 343 28 0.1263 0.0350 0.4286 5.3 1j93-a1-m1-cA_1j93-a1-m2-cA
36 1j93-a1-m1-cA 343 28 0.1263 0.0350 0.4286 5.3 1j93-a1-m1-cA_1j93-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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