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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
PHRYRPGTVALREIRRYQKSTELLIRRQPFARVVREICLLFTRGVDYRWQAMALLALQEA
AEAFLVHLLEDAYLCSLHARRVTLYPKDLQLARRLRG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7y7i-a1-m1-cE 97 97 1.0000 1.0000 1.0000 6.09e-66 7y7i-a1-m1-cE_7y7i-a1-m1-cA
2 7y7i-a1-m1-cA 102 97 1.0000 0.9510 1.0000 6.82e-66 7y7i-a1-m1-cE_7y7i-a1-m1-cA
3 5zbx-a1-m1-cE 101 97 0.8247 0.7921 0.8247 4.84e-55 5zbx-a1-m1-cA_5zbx-a1-m1-cE
4 5zbx-a1-m1-cA 95 97 0.7938 0.8105 0.7938 2.22e-50 5zbx-a1-m1-cA_5zbx-a1-m1-cE
5 8f86-a1-m1-cA 107 96 0.6701 0.6075 0.6771 1.35e-41 8f86-a1-m1-cE_8f86-a1-m1-cA
6 8f86-a1-m1-cE 95 95 0.6598 0.6737 0.6737 3.92e-40 8f86-a1-m1-cE_8f86-a1-m1-cA
7 7z0o-a1-m1-cC 97 97 0.6392 0.6392 0.6392 4.07e-39 7z0o-a1-m1-cA_7z0o-a1-m1-cC
8 4jjn-a1-m1-cA 98 97 0.6392 0.6327 0.6392 5.00e-39 4jjn-a1-m1-cE_4jjn-a1-m1-cA
9 5ay8-a1-m1-cA 97 96 0.6289 0.6289 0.6354 6.52e-39 5ay8-a1-m1-cE_5ay8-a1-m1-cA
10 5ay8-a1-m1-cE 96 96 0.6289 0.6354 0.6354 9.00e-39 5ay8-a1-m1-cE_5ay8-a1-m1-cA
11 7z0o-a1-m1-cA 94 96 0.6289 0.6489 0.6354 5.78e-38 7z0o-a1-m1-cA_7z0o-a1-m1-cC
12 4jjn-a1-m1-cE 96 96 0.6289 0.6354 0.6354 7.14e-38 4jjn-a1-m1-cE_4jjn-a1-m1-cA
13 6uph-a1-m1-cE 97 93 0.5567 0.5567 0.5806 1.17e-33 6uph-a1-m1-cA_6uph-a1-m1-cE
14 6uph-a1-m1-cA 93 90 0.5464 0.5699 0.5889 1.94e-32 6uph-a1-m1-cA_6uph-a1-m1-cE
15 6kxv-a1-m1-cA 94 95 0.5464 0.5638 0.5579 8.78e-32 6kxv-a1-m1-cA_6kxv-a1-m1-cE
16 6kxv-a1-m1-cE 95 95 0.5464 0.5579 0.5579 1.11e-31 6kxv-a1-m1-cA_6kxv-a1-m1-cE
17 2yfw-a2-m1-cE 88 88 0.5464 0.6023 0.6023 4.81e-31 2yfw-a2-m1-cC_2yfw-a2-m1-cE
18 7d69-a1-m1-cE 99 91 0.4330 0.4242 0.4615 4.24e-26 7d69-a1-m1-cA_7d69-a1-m1-cE
19 2yfw-a2-m1-cC 71 77 0.4433 0.6056 0.5584 7.67e-24 2yfw-a2-m1-cC_2yfw-a2-m1-cE
20 7d69-a1-m1-cA 90 83 0.4021 0.4333 0.4699 2.91e-23 7d69-a1-m1-cA_7d69-a1-m1-cE
21 6xwt-a1-m1-cC 74 68 0.2784 0.3649 0.3971 1.83e-09 6xwt-a1-m1-cA_6xwt-a1-m1-cC
22 6xwt-a1-m1-cA 74 68 0.2784 0.3649 0.3971 1.83e-09 6xwt-a1-m1-cA_6xwt-a1-m1-cC
23 7lv9-a1-m1-cE 102 81 0.2577 0.2451 0.3086 0.001 7lv9-a1-m1-cA_7lv9-a1-m1-cE
24 7lv9-a1-m1-cA 102 81 0.2577 0.2451 0.3086 0.001 7lv9-a1-m1-cA_7lv9-a1-m1-cE
25 5j79-a1-m1-cB 277 49 0.1546 0.0542 0.3061 0.25 5j79-a1-m1-cB_5j79-a1-m1-cA
26 4hi7-a1-m1-cB 219 62 0.1959 0.0868 0.3065 2.3 4hi7-a1-m1-cB_4hi7-a1-m1-cA
27 4hi7-a1-m1-cA 220 62 0.1959 0.0864 0.3065 2.3 4hi7-a1-m1-cB_4hi7-a1-m1-cA
28 3m3m-a2-m2-cA 197 31 0.1340 0.0660 0.4194 2.9 3m3m-a2-m1-cA_3m3m-a2-m2-cA
29 3m3m-a2-m1-cA 197 31 0.1340 0.0660 0.4194 2.9 3m3m-a2-m1-cA_3m3m-a2-m2-cA
30 2a61-a2-m1-cD 137 14 0.0825 0.0584 0.5714 3.5 2a61-a2-m1-cD_2a61-a2-m1-cC
31 2a61-a2-m1-cC 142 14 0.0825 0.0563 0.5714 3.8 2a61-a2-m1-cD_2a61-a2-m1-cC
32 3vwx-a2-m1-cC 220 73 0.2062 0.0909 0.2740 4.4 3vwx-a2-m1-cB_3vwx-a2-m1-cC
33 3vwx-a2-m1-cB 218 73 0.2062 0.0917 0.2740 4.9 3vwx-a2-m1-cB_3vwx-a2-m1-cC
34 5i8i-a2-m1-cD 1658 42 0.1753 0.0103 0.4048 5.4 5i8i-a2-m1-cD_5i8i-a2-m1-cC
35 5i8i-a2-m1-cC 1660 42 0.1753 0.0102 0.4048 5.4 5i8i-a2-m1-cD_5i8i-a2-m1-cC
36 4png-a1-m1-cA 221 18 0.1031 0.0452 0.5556 7.8 4png-a1-m1-cA_4png-a1-m1-cB
37 4png-a1-m1-cB 223 18 0.1031 0.0448 0.5556 7.8 4png-a1-m1-cA_4png-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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