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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
PHTHRVQIEYCTQCRWLPRAAWLAQELLTTFETELTELALKPGTGGVFVVRVDDEVVWDR
REQGFPEPTAVKRLVRDRVAPEK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3dex-a4-m1-cH 83 83 1.0000 1.0000 1.0000 9.39e-57 3dex-a4-m1-cG_3dex-a4-m1-cH
2 3dex-a4-m1-cG 77 77 0.9277 1.0000 1.0000 9.34e-52 3dex-a4-m1-cG_3dex-a4-m1-cH
3 2oka-a1-m1-cD 84 79 0.5301 0.5238 0.5570 9.80e-27 2oka-a1-m1-cA_2oka-a1-m1-cD, 2oka-a1-m1-cC_2oka-a1-m1-cD
4 2oka-a1-m1-cC 84 79 0.5301 0.5238 0.5570 9.80e-27 2oka-a1-m1-cC_2oka-a1-m1-cD
5 2oka-a1-m1-cA 84 79 0.5301 0.5238 0.5570 9.80e-27 2oka-a1-m1-cA_2oka-a1-m1-cD
6 2obk-a1-m1-cB 85 79 0.4940 0.4824 0.5190 8.70e-25 2obk-a1-m1-cA_2obk-a1-m1-cB
7 2obk-a2-m1-cH 83 79 0.4940 0.4940 0.5190 8.70e-25 2obk-a2-m1-cE_2obk-a2-m1-cH
8 2obk-a1-m1-cA 84 79 0.4940 0.4881 0.5190 8.85e-25 2obk-a1-m1-cA_2obk-a1-m1-cB
9 2ojl-a1-m2-cA 78 79 0.5181 0.5513 0.5443 4.53e-24 2ojl-a1-m2-cB_2ojl-a1-m2-cA
10 2ojl-a1-m1-cA 78 79 0.5181 0.5513 0.5443 4.53e-24 2ojl-a1-m2-cB_2ojl-a1-m1-cA
11 2obk-a2-m1-cE 80 77 0.4819 0.5000 0.5195 5.52e-24 2obk-a2-m1-cE_2obk-a2-m1-cH
12 2fa8-a1-m1-cB 86 80 0.4699 0.4535 0.4875 6.71e-24 2fa8-a1-m1-cC_2fa8-a1-m1-cB
13 2ojl-a1-m2-cB 76 76 0.5060 0.5526 0.5526 1.45e-23 2ojl-a1-m2-cB_2ojl-a1-m1-cA, 2ojl-a1-m2-cB_2ojl-a1-m2-cA
14 2fa8-a1-m1-cD 80 76 0.4458 0.4625 0.4868 2.84e-22 2fa8-a1-m1-cC_2fa8-a1-m1-cD
15 2fa8-a1-m1-cC 80 76 0.4458 0.4625 0.4868 2.88e-22 2fa8-a1-m1-cC_2fa8-a1-m1-cB, 2fa8-a1-m1-cC_2fa8-a1-m1-cD
16 2p0g-a1-m1-cD 79 78 0.4458 0.4684 0.4744 1.20e-19 2p0g-a1-m1-cA_2p0g-a1-m1-cD, 2p0g-a1-m1-cC_2p0g-a1-m1-cD
17 2p0g-a1-m1-cC 79 76 0.4337 0.4557 0.4737 7.01e-19 2p0g-a1-m1-cC_2p0g-a1-m1-cD
18 2p0g-a1-m1-cA 77 76 0.4337 0.4675 0.4737 7.35e-19 2p0g-a1-m1-cA_2p0g-a1-m1-cD
19 4nsv-a1-m1-cB 264 32 0.1566 0.0492 0.4062 5.1 4nsv-a1-m1-cA_4nsv-a1-m1-cB
20 4nsv-a1-m1-cA 264 32 0.1566 0.0492 0.4062 5.1 4nsv-a1-m1-cA_4nsv-a1-m1-cB
21 7ey9-a1-m1-cx 792 30 0.1325 0.0139 0.3667 8.2 7ey9-a1-m1-cw_7ey9-a1-m1-cx
22 7ey9-a1-m1-cw 792 30 0.1325 0.0139 0.3667 8.2 7ey9-a1-m1-cw_7ey9-a1-m1-cx

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Reference:
Jacob Schwartz et al.

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