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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
PHWMDPQLMGSQTTQYSRNRGYGDPIRGDLPIVPDDGGWFATRANPAHHLHTGALSMIGG
DASDCGSTAVQQLIKKYEDKGCNNNGLNVMSSHYGGVM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8hif-a1-m1-ct7 98 98 1.0000 1.0000 1.0000 3.72e-71 8hif-a1-m1-cs3_8hif-a1-m1-ct7
2 8hif-a1-m1-cs3 98 98 1.0000 1.0000 1.0000 3.72e-71 8hif-a1-m1-cs3_8hif-a1-m1-ct7
3 7o0t-a2-m2-cD 354 30 0.1224 0.0339 0.4000 2.0 7o0t-a2-m1-cB_7o0t-a2-m2-cD
4 7o0t-a2-m1-cB 354 30 0.1224 0.0339 0.4000 2.0 7o0t-a2-m1-cB_7o0t-a2-m2-cD
5 5jay-a3-m2-cA 385 48 0.1531 0.0390 0.3125 5.2 5jay-a3-m2-cB_5jay-a3-m2-cA
6 5jay-a3-m2-cB 364 43 0.1429 0.0385 0.3256 9.7 5jay-a3-m1-cB_5jay-a3-m2-cB, 5jay-a3-m2-cB_5jay-a3-m2-cA
7 5jay-a3-m1-cB 364 43 0.1429 0.0385 0.3256 9.7 5jay-a3-m1-cB_5jay-a3-m2-cB

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Reference:
Jacob Schwartz et al.

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