Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
PIIQMNLLEGRTVEQKRNAVAAITEAVVRTLDVRPDQVRILINELGVEHFSVAGQTAAMR
QAAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4fdx-a1-m3-cB 64 64 1.0000 1.0000 1.0000 8.75e-41 4fdx-a1-m2-cB_4fdx-a1-m3-cB, 4fdx-a1-m3-cA_4fdx-a1-m3-cB
2 4fdx-a1-m2-cB 64 64 1.0000 1.0000 1.0000 8.75e-41 4fdx-a1-m2-cB_4fdx-a1-m3-cB
3 4fdx-a1-m3-cA 61 61 0.9531 1.0000 1.0000 5.99e-39 4fdx-a1-m3-cA_4fdx-a1-m3-cB
4 1otf-a1-m1-cF 59 58 0.3594 0.3898 0.3966 3.03e-11 1otf-a1-m1-cC_1otf-a1-m1-cF
5 1otf-a1-m1-cE 59 58 0.3594 0.3898 0.3966 3.03e-11 1otf-a1-m1-cC_1otf-a1-m1-cE
6 1otf-a1-m1-cC 59 58 0.3594 0.3898 0.3966 3.03e-11 1otf-a1-m1-cC_1otf-a1-m1-cE, 1otf-a1-m1-cC_1otf-a1-m1-cF
7 2opa-a1-m3-cB 61 55 0.3594 0.3770 0.4182 4.45e-11 2opa-a1-m2-cB_2opa-a1-m3-cB, 2opa-a1-m3-cA_2opa-a1-m3-cB
8 2opa-a1-m3-cA 61 55 0.3594 0.3770 0.4182 4.45e-11 2opa-a1-m3-cA_2opa-a1-m3-cB
9 2opa-a1-m2-cB 61 55 0.3594 0.3770 0.4182 4.45e-11 2opa-a1-m2-cB_2opa-a1-m3-cB
10 7puo-a2-m1-cF 126 58 0.3438 0.1746 0.3793 1.51e-09 7puo-a2-m1-cF_7puo-a2-m1-cD, 7puo-a2-m1-cF_7puo-a2-m1-cE
11 7puo-a2-m1-cF 126 55 0.3594 0.1825 0.4182 9.04e-09 7puo-a2-m1-cF_7puo-a2-m1-cD, 7puo-a2-m1-cF_7puo-a2-m1-cE
12 7puo-a2-m1-cE 129 58 0.3438 0.1705 0.3793 1.74e-09 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cE
13 7puo-a2-m1-cE 129 55 0.3594 0.1783 0.4182 1.07e-08 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cE
14 7puo-a2-m1-cD 129 58 0.3438 0.1705 0.3793 1.74e-09 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cD
15 7puo-a2-m1-cD 129 55 0.3594 0.1783 0.4182 1.07e-08 7puo-a2-m1-cD_7puo-a2-m1-cE, 7puo-a2-m1-cF_7puo-a2-m1-cD
16 7xuy-a1-m6-cA 64 57 0.3125 0.3125 0.3509 2.24e-09 7xuy-a1-m3-cA_7xuy-a1-m6-cA, 7xuy-a1-m5-cA_7xuy-a1-m6-cA
17 7xuy-a1-m5-cA 64 57 0.3125 0.3125 0.3509 2.24e-09 7xuy-a1-m5-cA_7xuy-a1-m6-cA
18 7xuy-a1-m3-cA 64 57 0.3125 0.3125 0.3509 2.24e-09 7xuy-a1-m3-cA_7xuy-a1-m6-cA
19 2x4k-a1-m3-cB 62 54 0.3281 0.3387 0.3889 1.07e-08 2x4k-a1-m2-cB_2x4k-a1-m3-cB, 2x4k-a1-m3-cA_2x4k-a1-m3-cB
20 2x4k-a1-m3-cA 62 54 0.3281 0.3387 0.3889 1.07e-08 2x4k-a1-m3-cA_2x4k-a1-m3-cB
21 2x4k-a1-m2-cB 62 54 0.3281 0.3387 0.3889 1.07e-08 2x4k-a1-m2-cB_2x4k-a1-m3-cB
22 4faz-a1-m2-cC 62 57 0.2969 0.3065 0.3333 1.07e-07 4faz-a1-m1-cB_4faz-a1-m2-cC, 4faz-a1-m2-cB_4faz-a1-m2-cC
23 4faz-a1-m2-cB 62 57 0.2969 0.3065 0.3333 1.07e-07 4faz-a1-m2-cB_4faz-a1-m2-cC
24 4faz-a1-m1-cB 62 57 0.2969 0.3065 0.3333 1.07e-07 4faz-a1-m1-cB_4faz-a1-m2-cC
25 6blm-a1-m1-cC 127 57 0.3438 0.1732 0.3860 5.97e-07 6blm-a1-m1-cA_6blm-a1-m1-cC, 6blm-a1-m1-cB_6blm-a1-m1-cC
26 6blm-a1-m1-cB 127 57 0.3438 0.1732 0.3860 5.97e-07 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cB_6blm-a1-m1-cC
27 6blm-a1-m1-cA 127 57 0.3438 0.1732 0.3860 5.97e-07 6blm-a1-m1-cA_6blm-a1-m1-cB, 6blm-a1-m1-cA_6blm-a1-m1-cC
28 7m59-a1-m3-cB 64 56 0.3438 0.3438 0.3929 2.16e-06 7m59-a1-m2-cB_7m59-a1-m3-cB, 7m59-a1-m3-cA_7m59-a1-m3-cB
29 7m59-a1-m3-cA 64 56 0.3438 0.3438 0.3929 2.16e-06 7m59-a1-m3-cA_7m59-a1-m3-cB
30 7m59-a1-m2-cB 64 56 0.3438 0.3438 0.3929 2.16e-06 7m59-a1-m2-cB_7m59-a1-m3-cB
31 6vvn-a1-m1-cC 123 57 0.2969 0.1545 0.3333 2.46e-05 6vvn-a1-m1-cA_6vvn-a1-m1-cC, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
32 6vvn-a1-m1-cC 123 54 0.2500 0.1301 0.2963 0.001 6vvn-a1-m1-cA_6vvn-a1-m1-cC, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
33 6vvn-a1-m1-cB 123 57 0.2969 0.1545 0.3333 2.46e-05 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
34 6vvn-a1-m1-cB 123 54 0.2500 0.1301 0.2963 0.001 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cB_6vvn-a1-m1-cC
35 6vvn-a1-m1-cA 123 57 0.2969 0.1545 0.3333 2.46e-05 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cA_6vvn-a1-m1-cC
36 6vvn-a1-m1-cA 123 54 0.2500 0.1301 0.2963 0.001 6vvn-a1-m1-cA_6vvn-a1-m1-cB, 6vvn-a1-m1-cA_6vvn-a1-m1-cC
37 3ry0-a1-m3-cA 65 63 0.3281 0.3231 0.3333 2.89e-05 3ry0-a1-m3-cB_3ry0-a1-m3-cA
38 3ry0-a1-m3-cB 63 63 0.3281 0.3333 0.3333 3.02e-05 3ry0-a1-m2-cB_3ry0-a1-m3-cB, 3ry0-a1-m3-cB_3ry0-a1-m3-cA
39 3ry0-a1-m2-cB 63 63 0.3281 0.3333 0.3333 3.02e-05 3ry0-a1-m2-cB_3ry0-a1-m3-cB
40 3mb2-a1-m1-cE 61 57 0.2969 0.3115 0.3333 2.25e-04 3mb2-a1-m1-cA_3mb2-a1-m1-cE
41 3mb2-a1-m1-cA 61 57 0.2969 0.3115 0.3333 2.25e-04 3mb2-a1-m1-cA_3mb2-a1-m1-cE
42 6vvm-a1-m1-cC 123 57 0.2969 0.1545 0.3333 2.35e-04 6vvm-a1-m1-cA_6vvm-a1-m1-cC, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
43 6vvm-a1-m1-cC 123 55 0.2500 0.1301 0.2909 0.002 6vvm-a1-m1-cA_6vvm-a1-m1-cC, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
44 6vvm-a1-m1-cB 123 57 0.2969 0.1545 0.3333 2.35e-04 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
45 6vvm-a1-m1-cB 123 55 0.2500 0.1301 0.2909 0.002 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cB_6vvm-a1-m1-cC
46 6vvm-a1-m1-cA 123 57 0.2969 0.1545 0.3333 2.35e-04 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cA_6vvm-a1-m1-cC
47 6vvm-a1-m1-cA 123 55 0.2500 0.1301 0.2909 0.002 6vvm-a1-m1-cA_6vvm-a1-m1-cB, 6vvm-a1-m1-cA_6vvm-a1-m1-cC
48 3abf-a1-m1-cD 62 53 0.2656 0.2742 0.3208 2.61e-04 3abf-a1-m1-cD_3abf-a1-m1-cC
49 3abf-a1-m1-cC 63 53 0.2656 0.2698 0.3208 2.63e-04 3abf-a1-m1-cD_3abf-a1-m1-cC, 3abf-a1-m1-cE_3abf-a1-m1-cC
50 3abf-a1-m1-cE 61 53 0.2656 0.2787 0.3208 2.70e-04 3abf-a1-m1-cE_3abf-a1-m1-cC
51 7m58-a1-m1-cC 143 53 0.2500 0.1119 0.3019 8.83e-04 7m58-a1-m1-cB_7m58-a1-m1-cC
52 7m58-a1-m1-cB 143 53 0.2500 0.1119 0.3019 8.83e-04 7m58-a1-m1-cB_7m58-a1-m1-cC
53 5unq-a1-m1-cF 123 55 0.2500 0.1301 0.2909 0.003 5unq-a1-m1-cA_5unq-a1-m1-cF
54 5unq-a1-m1-cF 123 54 0.2188 0.1138 0.2593 0.20 5unq-a1-m1-cA_5unq-a1-m1-cF
55 5unq-a1-m1-cA 123 55 0.2500 0.1301 0.2909 0.003 5unq-a1-m1-cA_5unq-a1-m1-cF
56 5unq-a1-m1-cA 123 54 0.2188 0.1138 0.2593 0.20 5unq-a1-m1-cA_5unq-a1-m1-cF
57 6vvr-a1-m1-cC 123 58 0.2656 0.1382 0.2931 0.015 6vvr-a1-m1-cB_6vvr-a1-m1-cC
58 6vvr-a1-m1-cC 123 58 0.2344 0.1220 0.2586 0.064 6vvr-a1-m1-cB_6vvr-a1-m1-cC
59 6vvr-a1-m1-cB 123 58 0.2656 0.1382 0.2931 0.015 6vvr-a1-m1-cB_6vvr-a1-m1-cC
60 6vvr-a1-m1-cB 123 58 0.2344 0.1220 0.2586 0.064 6vvr-a1-m1-cB_6vvr-a1-m1-cC
61 6bwi-a1-m1-cD 816 62 0.3125 0.0245 0.3226 2.5 6bwi-a1-m1-cC_6bwi-a1-m1-cD
62 6bwi-a1-m1-cC 816 62 0.3125 0.0245 0.3226 2.5 6bwi-a1-m1-cC_6bwi-a1-m1-cD
63 4lhp-a4-m1-cL 131 26 0.1875 0.0916 0.4615 3.0 4lhp-a4-m1-cJ_4lhp-a4-m1-cL
64 4lhp-a4-m1-cL 131 31 0.1719 0.0840 0.3548 3.6 4lhp-a4-m1-cJ_4lhp-a4-m1-cL
65 4lhp-a4-m1-cJ 131 26 0.1875 0.0916 0.4615 3.0 4lhp-a4-m1-cJ_4lhp-a4-m1-cL
66 4lhp-a4-m1-cJ 131 31 0.1719 0.0840 0.3548 3.6 4lhp-a4-m1-cJ_4lhp-a4-m1-cL
67 1g8x-a1-m1-cB 1009 39 0.2188 0.0139 0.3590 3.3 1g8x-a1-m1-cA_1g8x-a1-m1-cB
68 1g8x-a1-m1-cA 1009 39 0.2188 0.0139 0.3590 3.3 1g8x-a1-m1-cA_1g8x-a1-m1-cB
69 5u4q-a1-m1-cA 308 35 0.2344 0.0487 0.4286 4.9 5u4q-a1-m1-cB_5u4q-a1-m1-cA
70 5z4y-a1-m1-cB 89 19 0.1562 0.1124 0.5263 5.6 5z4y-a1-m1-cA_5z4y-a1-m1-cB
71 5z4y-a1-m1-cA 89 19 0.1562 0.1124 0.5263 5.6 5z4y-a1-m1-cA_5z4y-a1-m1-cB
72 1gyy-a1-m1-cB 76 51 0.2031 0.1711 0.2549 7.7 1gyy-a1-m1-cA_1gyy-a1-m1-cB
73 1gyy-a1-m1-cA 76 51 0.2031 0.1711 0.2549 7.7 1gyy-a1-m1-cA_1gyy-a1-m1-cB
74 1s0y-a2-m1-cK 61 23 0.1562 0.1639 0.4348 9.6 1s0y-a2-m1-cK_1s0y-a2-m1-cG

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600