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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
PIQDGEFTFLLPAGRKQCFYQSAPANASLETEYQVIGGAGLDVDFTLESPQGVLLVSESR
KADGVHTVEPTEAGDYKLCFDNSFSTISEKLVFFELIFD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7rrm-a2-m2-cB 99 99 1.0000 1.0000 1.0000 1.81e-69 7rrm-a2-m1-cB_7rrm-a2-m2-cB
2 7rrm-a2-m1-cB 99 99 1.0000 1.0000 1.0000 1.81e-69 7rrm-a2-m1-cB_7rrm-a2-m2-cB
3 5gu5-a2-m2-cA 108 96 0.6566 0.6019 0.6771 1.09e-42 5gu5-a2-m1-cA_5gu5-a2-m2-cA
4 5gu5-a2-m1-cA 108 96 0.6566 0.6019 0.6771 1.09e-42 5gu5-a2-m1-cA_5gu5-a2-m2-cA
5 5azw-a1-m1-cB 93 86 0.2323 0.2473 0.2674 2.74e-09 5azw-a1-m1-cB_5azw-a1-m1-cA
6 5azw-a1-m1-cA 94 86 0.2323 0.2447 0.2674 3.05e-09 5azw-a1-m1-cB_5azw-a1-m1-cA
7 2iep-a3-m4-cA 187 32 0.1212 0.0642 0.3750 0.81 2iep-a3-m1-cA_2iep-a3-m4-cA, 2iep-a3-m4-cA_2iep-a3-m4-cB
8 2iep-a3-m1-cA 187 32 0.1212 0.0642 0.3750 0.81 2iep-a3-m1-cA_2iep-a3-m4-cA, 2iep-a3-m1-cA_2iep-a3-m4-cB
9 2iep-a2-m3-cA 187 32 0.1212 0.0642 0.3750 0.81 2iep-a2-m1-cB_2iep-a2-m3-cA
10 2iep-a3-m4-cB 187 32 0.1212 0.0642 0.3750 0.82 2iep-a3-m1-cA_2iep-a3-m4-cB, 2iep-a3-m1-cB_2iep-a3-m4-cB, 2iep-a3-m4-cA_2iep-a3-m4-cB
11 2iep-a3-m1-cB 187 32 0.1212 0.0642 0.3750 0.82 2iep-a3-m1-cB_2iep-a3-m4-cB
12 2iep-a2-m1-cB 187 32 0.1212 0.0642 0.3750 0.82 2iep-a2-m1-cB_2iep-a2-m3-cA
13 6lw8-a1-m2-cA 320 44 0.1515 0.0469 0.3409 4.2 6lw8-a1-m1-cA_6lw8-a1-m2-cA
14 6lw8-a1-m1-cA 320 44 0.1515 0.0469 0.3409 4.2 6lw8-a1-m1-cA_6lw8-a1-m2-cA
15 4c1o-a1-m2-cA 702 28 0.1313 0.0185 0.4643 6.1 4c1o-a1-m1-cA_4c1o-a1-m2-cA
16 4c1o-a1-m1-cA 702 28 0.1313 0.0185 0.4643 6.1 4c1o-a1-m1-cA_4c1o-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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