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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=40)
PIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ynx-a1-m1-cA 40 40 1.0000 1.0000 1.0000 1.02e-22 4ynx-a1-m1-cA_4ynx-a1-m1-cB
2 4ynx-a1-m1-cB 42 40 1.0000 0.9524 1.0000 1.27e-22 4ynx-a1-m1-cA_4ynx-a1-m1-cB
3 2jra-a1-m1-cB 67 37 0.3750 0.2239 0.4054 0.048 2jra-a1-m1-cA_2jra-a1-m1-cB
4 2jra-a1-m1-cA 67 37 0.3750 0.2239 0.4054 0.048 2jra-a1-m1-cA_2jra-a1-m1-cB
5 1xzo-a4-m1-cB 171 20 0.2750 0.0643 0.5500 0.43 1xzo-a4-m1-cB_1xzo-a4-m1-cA
6 1xzo-a4-m1-cA 172 20 0.2750 0.0640 0.5500 0.43 1xzo-a4-m1-cB_1xzo-a4-m1-cA
7 2fwv-a3-m4-cA 190 34 0.2750 0.0579 0.3235 2.4 2fwv-a3-m2-cA_2fwv-a3-m4-cA, 2fwv-a3-m3-cA_2fwv-a3-m4-cA
8 2fwv-a3-m3-cA 190 34 0.2750 0.0579 0.3235 2.4 2fwv-a3-m3-cA_2fwv-a3-m4-cA
9 2fwv-a3-m2-cA 190 34 0.2750 0.0579 0.3235 2.4 2fwv-a3-m2-cA_2fwv-a3-m4-cA
10 4zq8-a1-m1-cA 320 24 0.2750 0.0344 0.4583 5.6 4zq8-a1-m1-cA_4zq8-a1-m1-cB
11 4zq8-a1-m1-cB 321 24 0.2750 0.0343 0.4583 5.6 4zq8-a1-m1-cA_4zq8-a1-m1-cB
12 3h86-a3-m8-cC 191 22 0.2250 0.0471 0.4091 8.1 3h86-a3-m5-cG_3h86-a3-m8-cC
13 3h86-a3-m6-cG 191 22 0.2250 0.0471 0.4091 8.1 3h86-a3-m5-cG_3h86-a3-m6-cG
14 3h86-a3-m5-cG 191 22 0.2250 0.0471 0.4091 8.1 3h86-a3-m5-cG_3h86-a3-m6-cG, 3h86-a3-m5-cG_3h86-a3-m8-cC

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Reference:
Jacob Schwartz et al.

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