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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
PIVIDLNKTIERDGRKVKLVRATITVDPETNTITIDIEYEGGPITKEDLLEAFKLAASKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8d05-a1-m2-cA 60 60 1.0000 1.0000 1.0000 4.75e-37 8d05-a1-m1-cA_8d05-a1-m2-cA
2 8d05-a1-m1-cA 60 60 1.0000 1.0000 1.0000 4.75e-37 8d05-a1-m1-cA_8d05-a1-m2-cA
3 7lr1-a2-m1-cB 418 29 0.1333 0.0191 0.2759 4.1 7lr1-a2-m1-cB_7lr1-a2-m1-cD
4 7lr1-a2-m1-cD 424 29 0.1333 0.0189 0.2759 4.1 7lr1-a2-m1-cB_7lr1-a2-m1-cD
5 6nn7-a1-m1-cD 479 38 0.2333 0.0292 0.3684 4.8 6nn7-a1-m1-cB_6nn7-a1-m1-cD
6 1poy-a2-m1-c4 323 39 0.2333 0.0433 0.3590 7.4 1poy-a2-m1-c3_1poy-a2-m1-c4
7 1poy-a2-m1-c3 323 39 0.2333 0.0433 0.3590 7.4 1poy-a2-m1-c3_1poy-a2-m1-c4
8 6r6u-a1-m1-cB 456 18 0.1500 0.0197 0.5000 8.8 6r6u-a1-m1-cB_6r6u-a1-m1-cA
9 6r6u-a1-m1-cA 457 18 0.1500 0.0197 0.5000 8.9 6r6u-a1-m1-cB_6r6u-a1-m1-cA
10 5ed4-a2-m1-cE 224 32 0.2000 0.0536 0.3750 9.2 5ed4-a2-m1-cF_5ed4-a2-m1-cE
11 1r30-a1-m1-cB 313 51 0.2167 0.0415 0.2549 9.9 1r30-a1-m1-cA_1r30-a1-m1-cB
12 1ei5-a1-m2-cA 518 15 0.1500 0.0174 0.6000 10.0 1ei5-a1-m1-cA_1ei5-a1-m2-cA
13 1ei5-a1-m1-cA 518 15 0.1500 0.0174 0.6000 10.0 1ei5-a1-m1-cA_1ei5-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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