Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
PKDAQVIMSILKELNVQEYEPRVVNQLLEFTFRYVTSILDDAKVYANHARKKTIDLDDVR
LATEVTLD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1taf-a2-m5-cA 68 68 1.0000 1.0000 1.0000 9.85e-45 1taf-a2-m4-cA_1taf-a2-m5-cA
2 1taf-a2-m4-cA 68 68 1.0000 1.0000 1.0000 9.85e-45 1taf-a2-m4-cA_1taf-a2-m5-cA
3 7da0-a1-m2-cB 95 43 0.2059 0.1474 0.3256 0.006 7da0-a1-m1-cB_7da0-a1-m2-cB
4 7da0-a1-m1-cB 95 43 0.2059 0.1474 0.3256 0.006 7da0-a1-m1-cB_7da0-a1-m2-cB
5 1ku5-a1-m1-cB 66 53 0.1912 0.1970 0.2453 0.034 1ku5-a1-m1-cA_1ku5-a1-m1-cB
6 1ku5-a1-m1-cA 66 53 0.1912 0.1970 0.2453 0.034 1ku5-a1-m1-cA_1ku5-a1-m1-cB
7 7d69-a1-m1-cA 90 47 0.2206 0.1667 0.3191 0.11 7d69-a1-m1-cA_7d69-a1-m1-cE
8 7d69-a1-m1-cE 99 47 0.2206 0.1515 0.3191 0.11 7d69-a1-m1-cA_7d69-a1-m1-cE
9 7z0o-a1-m1-cA 94 44 0.1912 0.1383 0.2955 0.34 7z0o-a1-m1-cA_7z0o-a1-m1-cC
10 7z0o-a1-m1-cC 97 44 0.1912 0.1340 0.2955 0.34 7z0o-a1-m1-cA_7z0o-a1-m1-cC
11 4jjn-a1-m1-cA 98 44 0.1912 0.1327 0.2955 0.36 4jjn-a1-m1-cE_4jjn-a1-m1-cA
12 4jjn-a1-m1-cE 96 44 0.1912 0.1354 0.2955 0.36 4jjn-a1-m1-cE_4jjn-a1-m1-cA
13 3v9r-a1-m1-cC 85 42 0.1765 0.1412 0.2857 0.55 3v9r-a1-m1-cC_3v9r-a1-m1-cA
14 3v9r-a1-m1-cA 86 42 0.1765 0.1395 0.2857 0.58 3v9r-a1-m1-cC_3v9r-a1-m1-cA
15 5owv-a1-m1-cD 598 26 0.1471 0.0167 0.3846 1.3 5owv-a1-m1-cC_5owv-a1-m1-cD
16 5owv-a1-m1-cC 598 26 0.1471 0.0167 0.3846 1.3 5owv-a1-m1-cC_5owv-a1-m1-cD
17 2np0-a2-m2-cA 1289 52 0.2206 0.0116 0.2885 1.3 2np0-a2-m1-cA_2np0-a2-m2-cA
18 2np0-a2-m1-cA 1289 52 0.2206 0.0116 0.2885 1.3 2np0-a2-m1-cA_2np0-a2-m2-cA
19 2yfw-a2-m1-cD 71 26 0.1471 0.1408 0.3846 3.0 2yfw-a2-m1-cD_2yfw-a2-m1-cF
20 2yfw-a2-m1-cF 72 26 0.1471 0.1389 0.3846 3.1 2yfw-a2-m1-cD_2yfw-a2-m1-cF
21 7x58-a1-m1-cH 73 26 0.1324 0.1233 0.3462 6.2 7x58-a1-m1-cB_7x58-a1-m1-cH
22 7x58-a1-m1-cB 73 26 0.1324 0.1233 0.3462 6.2 7x58-a1-m1-cB_7x58-a1-m1-cH

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600