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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
PKFDDEYQAQARQAPLNPYPGLTVTEPSFANPAGGYADGDLYPVGTSHPSQGGMIFDPAP
RREDMPPGWMPGSKYDEPFGP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7teo-a1-m1-cb 81 81 1.0000 1.0000 1.0000 9.66e-55 7teo-a1-m1-ca_7teo-a1-m1-cb
2 7teo-a1-m1-ca 81 81 1.0000 1.0000 1.0000 9.66e-55 7teo-a1-m1-ca_7teo-a1-m1-cb
3 5dgr-a1-m1-cA 573 50 0.1605 0.0227 0.2600 0.089 5dgr-a1-m1-cB_5dgr-a1-m1-cA
4 5dgr-a1-m1-cB 571 50 0.1605 0.0228 0.2600 0.091 5dgr-a1-m1-cB_5dgr-a1-m1-cA
5 7som-a1-m1-cH 982 32 0.1605 0.0132 0.4062 0.37 7som-a1-m1-cH_7som-a1-m1-cI
6 7som-a1-m1-cI 993 32 0.1605 0.0131 0.4062 0.38 7som-a1-m1-cH_7som-a1-m1-cI
7 2ia2-a3-m1-cB 243 42 0.1852 0.0617 0.3571 0.94 2ia2-a3-m1-cB_2ia2-a3-m1-cA, 2ia2-a3-m1-cD_2ia2-a3-m1-cB
8 2ia2-a3-m1-cD 242 42 0.1852 0.0620 0.3571 1.2 2ia2-a3-m1-cD_2ia2-a3-m1-cA, 2ia2-a3-m1-cD_2ia2-a3-m1-cB
9 2ia2-a3-m1-cA 247 41 0.1852 0.0607 0.3659 2.0 2ia2-a3-m1-cB_2ia2-a3-m1-cA, 2ia2-a3-m1-cD_2ia2-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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