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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
PKFVRLRGLPWSATHKEILDFLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVASQEDVE
EARKLNKASMGHRYIEVFTATPKEAKEAMR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5uzg-a1-m1-cA 90 90 1.0000 1.0000 1.0000 1.52e-63 5uzg-a1-m1-cB_5uzg-a1-m1-cA
2 5uzg-a1-m1-cB 84 89 0.9333 1.0000 0.9438 2.29e-56 5uzg-a1-m1-cB_5uzg-a1-m1-cA
3 4qu6-a2-m2-cA 99 88 0.3556 0.3232 0.3636 3.03e-20 4qu6-a2-m1-cA_4qu6-a2-m2-cA
4 4qu6-a2-m1-cA 99 88 0.3556 0.3232 0.3636 3.03e-20 4qu6-a2-m1-cA_4qu6-a2-m2-cA
5 7vkj-a1-m1-cE 101 82 0.3333 0.2970 0.3659 2.07e-13 7vkj-a1-m1-cE_7vkj-a1-m1-cA
6 7vkj-a1-m1-cG 104 82 0.3333 0.2885 0.3659 2.68e-13 7vkj-a1-m1-cF_7vkj-a1-m1-cG
7 7vkj-a1-m1-cF 104 82 0.3333 0.2885 0.3659 2.68e-13 7vkj-a1-m1-cF_7vkj-a1-m1-cG
8 7vkj-a1-m1-cD 104 82 0.3333 0.2885 0.3659 2.68e-13 7vkj-a1-m1-cC_7vkj-a1-m1-cD
9 7vkj-a1-m1-cC 104 82 0.3333 0.2885 0.3659 2.68e-13 7vkj-a1-m1-cC_7vkj-a1-m1-cD
10 7vkj-a1-m1-cA 104 82 0.3333 0.2885 0.3659 2.68e-13 7vkj-a1-m1-cE_7vkj-a1-m1-cA
11 4ppm-a1-m1-cB 462 52 0.1667 0.0325 0.2885 0.30 4ppm-a1-m1-cB_4ppm-a1-m1-cA
12 4ppm-a1-m1-cA 464 52 0.1667 0.0323 0.2885 0.31 4ppm-a1-m1-cB_4ppm-a1-m1-cA
13 5bjr-a2-m3-cB 84 59 0.2000 0.2143 0.3051 0.40 5bjr-a2-m1-cB_5bjr-a2-m3-cB
14 5bjr-a2-m1-cB 84 59 0.2000 0.2143 0.3051 0.40 5bjr-a2-m1-cB_5bjr-a2-m3-cB
15 5tkz-a1-m1-cB 89 59 0.2000 0.2022 0.3051 0.47 5tkz-a1-m1-cA_5tkz-a1-m1-cB
16 5tkz-a1-m1-cA 89 59 0.2000 0.2022 0.3051 0.47 5tkz-a1-m1-cA_5tkz-a1-m1-cB
17 6tug-a4-m1-cG 407 76 0.2000 0.0442 0.2368 0.81 6tug-a4-m1-cG_6tug-a4-m1-cH
18 5ybv-a1-m1-cB 243 35 0.1111 0.0412 0.2857 2.8 5ybv-a1-m1-cB_5ybv-a1-m1-cA
19 5ybv-a1-m1-cA 244 35 0.1111 0.0410 0.2857 2.8 5ybv-a1-m1-cB_5ybv-a1-m1-cA
20 6tug-a4-m1-cH 414 68 0.1778 0.0386 0.2353 3.0 6tug-a4-m1-cG_6tug-a4-m1-cH
21 4bjr-a1-m1-cA 500 59 0.2111 0.0380 0.3220 4.0 4bjr-a1-m1-cB_4bjr-a1-m1-cA
22 2j85-a1-m1-cB 112 42 0.1556 0.1250 0.3333 6.2 2j85-a1-m1-cB_2j85-a1-m1-cA
23 2j85-a1-m1-cA 113 46 0.1556 0.1239 0.3043 6.6 2j85-a1-m1-cB_2j85-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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