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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
PKHEFSVDMTCGGCAEAVSRVLNKLGGVKYDIDLPNKKVCIESEHSMDTLLATLKKTGKT
VSYLGLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7zc3-a1-m1-cB 67 67 1.0000 1.0000 1.0000 6.46e-45 7zc3-a1-m1-cA_7zc3-a1-m1-cB
2 7zc3-a1-m1-cA 67 67 1.0000 1.0000 1.0000 6.46e-45 7zc3-a1-m1-cA_7zc3-a1-m1-cB
3 3iwl-a2-m2-cA 66 66 0.9851 1.0000 1.0000 3.98e-44 3iwl-a2-m1-cA_3iwl-a2-m2-cA
4 3iwl-a2-m1-cA 66 66 0.9851 1.0000 1.0000 3.98e-44 3iwl-a2-m1-cA_3iwl-a2-m2-cA
5 5f0u-a1-m2-cA 65 52 0.2687 0.2769 0.3462 0.003 5f0u-a1-m1-cA_5f0u-a1-m2-cA
6 5f0u-a1-m1-cA 65 52 0.2687 0.2769 0.3462 0.003 5f0u-a1-m1-cA_5f0u-a1-m2-cA
7 6ff2-a1-m1-cB 67 39 0.2239 0.2239 0.3846 0.007 6ff2-a1-m1-cA_6ff2-a1-m1-cB
8 6ff2-a1-m1-cA 67 39 0.2239 0.2239 0.3846 0.007 6ff2-a1-m1-cA_6ff2-a1-m1-cB
9 1jk9-a4-m3-cD 243 56 0.1940 0.0535 0.2321 0.53 1jk9-a4-m3-cB_1jk9-a4-m3-cD
10 1jk9-a4-m3-cB 243 56 0.1940 0.0535 0.2321 0.53 1jk9-a4-m3-cB_1jk9-a4-m3-cD
11 3now-a2-m3-cA 786 45 0.2537 0.0216 0.3778 0.60 3now-a2-m2-cA_3now-a2-m3-cA
12 3now-a2-m2-cA 786 45 0.2537 0.0216 0.3778 0.60 3now-a2-m2-cA_3now-a2-m3-cA
13 6fon-a1-m1-cC 252 64 0.2537 0.0675 0.2656 0.66 6fon-a1-m1-cA_6fon-a1-m1-cC
14 6fon-a1-m1-cA 252 64 0.2537 0.0675 0.2656 0.66 6fon-a1-m1-cA_6fon-a1-m1-cC
15 6ba1-a9-m1-cQ 316 34 0.1493 0.0316 0.2941 2.3 6ba1-a9-m1-cO_6ba1-a9-m1-cQ
16 6ba1-a9-m1-cO 316 34 0.1493 0.0316 0.2941 2.3 6ba1-a9-m1-cO_6ba1-a9-m1-cQ
17 2btv-a1-m9-cA 845 21 0.1343 0.0107 0.4286 4.0 2btv-a1-m8-cA_2btv-a1-m9-cA, 2btv-a1-m9-cA_2btv-a1-m9-cB
18 2btv-a1-m8-cA 845 21 0.1343 0.0107 0.4286 4.0 2btv-a1-m8-cA_2btv-a1-m9-cA
19 2btv-a1-m24-cA 845 21 0.1343 0.0107 0.4286 4.0 2btv-a1-m24-cA_2btv-a1-m9-cB
20 2btv-a1-m10-cA 845 21 0.1343 0.0107 0.4286 4.0 2btv-a1-m10-cA_2btv-a1-m9-cB
21 2btv-a1-m9-cB 885 21 0.1343 0.0102 0.4286 4.0 2btv-a1-m10-cA_2btv-a1-m9-cB, 2btv-a1-m24-cA_2btv-a1-m9-cB, 2btv-a1-m54-cB_2btv-a1-m9-cB, 2btv-a1-m9-cA_2btv-a1-m9-cB
22 2btv-a1-m54-cB 885 21 0.1343 0.0102 0.4286 4.0 2btv-a1-m54-cB_2btv-a1-m9-cB
23 7waa-a1-m1-cB 322 46 0.2239 0.0466 0.3261 4.9 7waa-a1-m1-cA_7waa-a1-m1-cB
24 7waa-a1-m1-cA 322 46 0.2239 0.0466 0.3261 4.9 7waa-a1-m1-cA_7waa-a1-m1-cB
25 5k4p-a1-m2-cA 323 46 0.2239 0.0464 0.3261 4.9 5k4p-a1-m1-cA_5k4p-a1-m2-cA
26 5k4p-a1-m1-cA 323 46 0.2239 0.0464 0.3261 4.9 5k4p-a1-m1-cA_5k4p-a1-m2-cA
27 1t71-a2-m2-cA 281 38 0.2090 0.0498 0.3684 4.9 1t71-a2-m1-cA_1t71-a2-m2-cA
28 1t71-a2-m1-cA 281 38 0.2090 0.0498 0.3684 4.9 1t71-a2-m1-cA_1t71-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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