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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
PKRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQAC
RFMKCLKVGMLKEGVRLDRV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8ifo-a1-m1-cB 80 80 1.0000 1.0000 1.0000 4.65e-55 8ifo-a1-m1-cA_8ifo-a1-m1-cB
2 8ifo-a1-m1-cA 76 76 0.9500 1.0000 1.0000 1.75e-51 8ifo-a1-m1-cA_8ifo-a1-m1-cB
3 1hcq-a2-m1-cE 74 70 0.6250 0.6757 0.7143 9.33e-33 1hcq-a2-m1-cF_1hcq-a2-m1-cE
4 4oln-a1-m1-cA 70 70 0.6500 0.7429 0.7429 1.84e-32 4oln-a1-m1-cB_4oln-a1-m1-cA
5 1hcq-a2-m1-cF 71 70 0.6250 0.7042 0.7143 7.81e-31 1hcq-a2-m1-cF_1hcq-a2-m1-cE
6 4oln-a1-m1-cB 67 69 0.6375 0.7612 0.7391 1.25e-30 4oln-a1-m1-cB_4oln-a1-m1-cA
7 6l6l-a1-m1-cB 84 75 0.5750 0.5476 0.6133 1.14e-27 6l6l-a1-m1-cB_6l6l-a1-m1-cA
8 6l6l-a1-m1-cA 85 75 0.5750 0.5412 0.6133 1.23e-27 6l6l-a1-m1-cB_6l6l-a1-m1-cA
9 6fbq-a1-m1-cB 81 79 0.5000 0.4938 0.5063 1.76e-25 6fbq-a1-m1-cA_6fbq-a1-m1-cB
10 6fbq-a1-m1-cA 80 79 0.5000 0.5000 0.5063 1.95e-25 6fbq-a1-m1-cA_6fbq-a1-m1-cB
11 7xv6-a1-m1-cA 84 75 0.5000 0.4762 0.5333 2.25e-24 7xv6-a1-m1-cB_7xv6-a1-m1-cA
12 7xv9-a1-m1-cB 80 72 0.4875 0.4875 0.5417 1.02e-23 7xv9-a1-m1-cA_7xv9-a1-m1-cB
13 7xv9-a1-m1-cA 80 72 0.4875 0.4875 0.5417 1.02e-23 7xv9-a1-m1-cA_7xv9-a1-m1-cB
14 7xv6-a1-m1-cB 77 72 0.4875 0.5065 0.5417 1.12e-23 7xv6-a1-m1-cB_7xv6-a1-m1-cA
15 2c7a-a1-m1-cB 76 74 0.4750 0.5000 0.5135 3.69e-23 2c7a-a1-m1-cB_2c7a-a1-m1-cA
16 2c7a-a1-m1-cA 78 74 0.4750 0.4872 0.5135 4.54e-23 2c7a-a1-m1-cB_2c7a-a1-m1-cA
17 1r4i-a1-m1-cA 74 70 0.4500 0.4865 0.5143 4.54e-22 1r4i-a1-m1-cB_1r4i-a1-m1-cA
18 1r4i-a1-m1-cB 71 68 0.4375 0.4930 0.5147 1.23e-20 1r4i-a1-m1-cB_1r4i-a1-m1-cA
19 2x5q-a1-m1-cB 180 47 0.1625 0.0722 0.2766 0.014 2x5q-a1-m1-cB_2x5q-a1-m1-cA
20 7rw6-a1-m1-cC 642 39 0.2000 0.0249 0.4103 2.6 7rw6-a1-m1-cA_7rw6-a1-m1-cC
21 7rw6-a1-m1-cA 642 39 0.2000 0.0249 0.4103 2.6 7rw6-a1-m1-cA_7rw6-a1-m1-cC
22 7lv7-a2-m1-cC 355 46 0.2125 0.0479 0.3696 3.8 7lv7-a2-m1-cC_7lv7-a2-m1-cD
23 7lv7-a2-m1-cD 356 46 0.2125 0.0478 0.3696 3.8 7lv7-a2-m1-cC_7lv7-a2-m1-cD
24 7xlc-a1-m1-cA 828 41 0.1750 0.0169 0.3415 9.4 7xlc-a1-m1-cA_7xlc-a1-m1-cB
25 7xlc-a1-m1-cB 829 41 0.1750 0.0169 0.3415 9.4 7xlc-a1-m1-cA_7xlc-a1-m1-cB
26 7xgd-a1-m1-cB 836 41 0.1750 0.0167 0.3415 9.4 7xgd-a1-m1-cA_7xgd-a1-m1-cB
27 7xgd-a1-m1-cA 836 41 0.1750 0.0167 0.3415 9.4 7xgd-a1-m1-cA_7xgd-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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