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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
PKVTVSIKVVPAVEDGRLHEVIDRAIEKISSWGKYEVGPSNTTVEGEFEEIDRVKELARY
LEQFAKRFVLQLDIDYKAGGITIEEKVSKYR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1vk8-a1-m1-cD 91 91 1.0000 1.0000 1.0000 1.56e-61 1vk8-a1-m1-cA_1vk8-a1-m1-cD, 1vk8-a1-m1-cB_1vk8-a1-m1-cD, 1vk8-a1-m1-cC_1vk8-a1-m1-cD
2 1vk8-a1-m1-cC 91 91 1.0000 1.0000 1.0000 1.56e-61 1vk8-a1-m1-cC_1vk8-a1-m1-cD
3 1vk8-a1-m1-cB 91 91 1.0000 1.0000 1.0000 1.56e-61 1vk8-a1-m1-cB_1vk8-a1-m1-cD
4 1vk8-a1-m1-cA 91 91 1.0000 1.0000 1.0000 1.56e-61 1vk8-a1-m1-cA_1vk8-a1-m1-cD
5 1yqh-a1-m2-cB 98 90 0.3736 0.3469 0.3778 9.07e-08 1yqh-a1-m1-cB_1yqh-a1-m2-cB, 1yqh-a1-m2-cB_1yqh-a1-m2-cA
6 1yqh-a1-m1-cB 98 90 0.3736 0.3469 0.3778 9.07e-08 1yqh-a1-m1-cB_1yqh-a1-m2-cB
7 1yqh-a1-m2-cA 101 90 0.3736 0.3366 0.3778 9.12e-08 1yqh-a1-m2-cB_1yqh-a1-m2-cA
8 2ibo-a1-m1-cD 87 55 0.1978 0.2069 0.3273 0.013 2ibo-a1-m1-cA_2ibo-a1-m1-cD, 2ibo-a1-m1-cB_2ibo-a1-m1-cD, 2ibo-a1-m1-cC_2ibo-a1-m1-cD
9 2ibo-a1-m1-cC 87 55 0.1978 0.2069 0.3273 0.013 2ibo-a1-m1-cC_2ibo-a1-m1-cD
10 2ibo-a1-m1-cB 87 55 0.1978 0.2069 0.3273 0.013 2ibo-a1-m1-cB_2ibo-a1-m1-cD
11 2ibo-a1-m1-cA 87 55 0.1978 0.2069 0.3273 0.013 2ibo-a1-m1-cA_2ibo-a1-m1-cD
12 1wnc-a2-m1-cB 81 46 0.1538 0.1728 0.3043 0.28 1wnc-a2-m1-cC_1wnc-a2-m1-cB
13 1wnc-a1-m1-cB 81 46 0.1538 0.1728 0.3043 0.28 1wnc-a1-m1-cF_1wnc-a1-m1-cB
14 1wnc-a1-m1-cF 75 46 0.1538 0.1867 0.3043 0.90 1wnc-a1-m1-cF_1wnc-a1-m1-cB
15 1wnc-a2-m1-cC 78 46 0.1538 0.1795 0.3043 1.4 1wnc-a2-m1-cC_1wnc-a2-m1-cB
16 3nyt-a1-m2-cA 359 32 0.1099 0.0279 0.3125 7.2 3nyt-a1-m1-cA_3nyt-a1-m2-cA
17 3nyt-a1-m1-cA 359 32 0.1099 0.0279 0.3125 7.2 3nyt-a1-m1-cA_3nyt-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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