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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
PLFDIVGHNLEIVLPLAPWEAALGAKVTVPTKESILLTVPPGSQAGQRLRIKGKGLTGDL
FAVIKIVPTKPDEKARELWQQLAAAEASFDPRKTW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3i38-a7-m1-cI 95 95 1.0000 1.0000 1.0000 3.13e-64 3i38-a7-m1-cI_3i38-a7-m1-cJ
2 3i38-a7-m1-cB 100 99 1.0000 0.9500 0.9596 1.71e-60 3i38-a7-m1-cB_3i38-a7-m1-cD, 3i38-a7-m1-cF_3i38-a7-m1-cB
3 3i38-a7-m1-cF 99 98 1.0000 0.9596 0.9694 2.05e-60 3i38-a7-m1-cF_3i38-a7-m1-cB
4 3i38-a7-m1-cJ 100 99 1.0000 0.9500 0.9596 2.26e-60 3i38-a7-m1-cI_3i38-a7-m1-cJ
5 3i38-a7-m1-cD 102 101 1.0000 0.9314 0.9406 4.30e-60 3i38-a7-m1-cB_3i38-a7-m1-cD
6 6psi-a1-m1-cC 280 94 0.3789 0.1286 0.3830 9.09e-09 6psi-a1-m1-cA_6psi-a1-m1-cC
7 6psi-a1-m1-cC 280 67 0.2211 0.0750 0.3134 0.047 6psi-a1-m1-cA_6psi-a1-m1-cC
8 6psi-a1-m1-cA 280 94 0.3789 0.1286 0.3830 9.09e-09 6psi-a1-m1-cA_6psi-a1-m1-cC
9 6psi-a1-m1-cA 280 67 0.2211 0.0750 0.3134 0.047 6psi-a1-m1-cA_6psi-a1-m1-cC
10 4j80-a2-m1-cD 265 93 0.3474 0.1245 0.3548 5.45e-06 4j80-a2-m1-cC_4j80-a2-m1-cD
11 4j80-a2-m1-cC 265 93 0.3474 0.1245 0.3548 5.45e-06 4j80-a2-m1-cC_4j80-a2-m1-cD
12 1v4n-a1-m1-cC 267 26 0.1158 0.0412 0.4231 8.4 1v4n-a1-m1-cC_1v4n-a1-m1-cB
13 1v4n-a1-m1-cB 269 26 0.1158 0.0409 0.4231 8.5 1v4n-a1-m1-cC_1v4n-a1-m1-cB
14 3d4o-a3-m1-cD 279 59 0.2526 0.0860 0.4068 9.1 3d4o-a3-m1-cD_3d4o-a3-m1-cB, 3d4o-a3-m1-cD_3d4o-a3-m1-cC
15 3d4o-a3-m1-cC 280 59 0.2526 0.0857 0.4068 9.3 3d4o-a3-m1-cD_3d4o-a3-m1-cC

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Reference:
Jacob Schwartz et al.

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