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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
PLGSMKIELSGGYICYSIEEDEVTIDMVEVTTKRQGIGSQLIDMVKDVAREVGLPIGLYA
YPQDDSISQEDLIEFYFSNDFEYDPDDVDGRLMRWS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6iuf-a1-m1-cA 96 96 1.0000 1.0000 1.0000 2.59e-66 6iuf-a1-m1-cB_6iuf-a1-m1-cA
2 6iuf-a1-m1-cB 95 95 0.9896 1.0000 1.0000 2.72e-65 6iuf-a1-m1-cB_6iuf-a1-m1-cA
3 3fkd-a2-m1-cC 318 36 0.1458 0.0440 0.3889 0.42 3fkd-a2-m1-cB_3fkd-a2-m1-cC
4 3fkd-a2-m1-cB 318 36 0.1458 0.0440 0.3889 0.42 3fkd-a2-m1-cB_3fkd-a2-m1-cC
5 7b0h-a1-m1-cF 762 77 0.1979 0.0249 0.2468 4.1 7b0h-a1-m1-cE_7b0h-a1-m1-cF
6 7b0h-a1-m1-cE 713 77 0.1979 0.0266 0.2468 5.2 7b0h-a1-m1-cE_7b0h-a1-m1-cF
7 1a7t-a1-m1-cB 227 46 0.1250 0.0529 0.2609 6.5 1a7t-a1-m1-cA_1a7t-a1-m1-cB
8 1a7t-a1-m1-cA 227 46 0.1250 0.0529 0.2609 6.5 1a7t-a1-m1-cA_1a7t-a1-m1-cB
9 2bmi-a1-m1-cA 228 46 0.1250 0.0526 0.2609 6.9 2bmi-a1-m1-cA_2bmi-a1-m1-cB
10 2bmi-a1-m1-cB 230 46 0.1250 0.0522 0.2609 7.0 2bmi-a1-m1-cA_2bmi-a1-m1-cB
11 4hg5-a1-m1-cA 304 36 0.1250 0.0395 0.3333 7.1 4hg5-a1-m1-cC_4hg5-a1-m1-cA
12 3msu-a1-m1-cA 415 42 0.1667 0.0386 0.3810 7.3 3msu-a1-m1-cA_3msu-a1-m1-cB
13 4hg5-a1-m1-cC 301 36 0.1250 0.0399 0.3333 7.8 4hg5-a1-m1-cC_4hg5-a1-m1-cA
14 3msu-a1-m1-cB 426 42 0.1667 0.0376 0.3810 8.3 3msu-a1-m1-cA_3msu-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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