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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
PLLTIETPRHLGEQLNARRKELGIDLYTLELQTGISTSTLKRLFKDPEQVKFGSVFAVAN
VLGVKLCIGE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7ab5-a1-m1-cD 70 70 1.0000 1.0000 1.0000 1.82e-46 7ab5-a1-m1-cA_7ab5-a1-m1-cD
2 7ab5-a1-m1-cA 70 70 1.0000 1.0000 1.0000 1.82e-46 7ab5-a1-m1-cA_7ab5-a1-m1-cD
3 8glv-a1-m1-cGa 366 27 0.1714 0.0328 0.4444 1.5 8glv-a1-m1-cGi_8glv-a1-m1-cGa
4 8glv-a1-m1-c4R 366 27 0.1714 0.0328 0.4444 1.5 8glv-a1-m1-cOG_8glv-a1-m1-c4R
5 7dn2-a1-m9-cg 370 63 0.3000 0.0568 0.3333 3.1 7dn2-a1-m55-cb_7dn2-a1-m9-cg, 7dn2-a1-m8-cb_7dn2-a1-m9-cg, 7dn2-a1-m9-cg_7dn2-a1-m55-cd, 7dn2-a1-m9-cg_7dn2-a1-m9-cd
6 5yz0-a1-m1-cB 2362 58 0.2429 0.0072 0.2931 3.9 5yz0-a1-m1-cA_5yz0-a1-m1-cB
7 5yz0-a1-m1-cA 2362 58 0.2429 0.0072 0.2931 3.9 5yz0-a1-m1-cA_5yz0-a1-m1-cB
8 3gr3-a1-m1-cB 218 28 0.1714 0.0550 0.4286 4.0 3gr3-a1-m1-cA_3gr3-a1-m1-cB
9 3gr3-a1-m1-cA 218 28 0.1714 0.0550 0.4286 4.0 3gr3-a1-m1-cA_3gr3-a1-m1-cB
10 7som-a1-m1-cE 1516 44 0.2286 0.0106 0.3636 4.3 7som-a1-m1-cD_7som-a1-m1-cE
11 7som-a1-m1-cD 1516 44 0.2286 0.0106 0.3636 4.3 7som-a1-m1-cD_7som-a1-m1-cE
12 3kor-a2-m1-cC 96 43 0.1714 0.1250 0.2791 5.4 3kor-a2-m1-cC_3kor-a2-m1-cB
13 8glv-a1-m1-cGi 205 28 0.1714 0.0585 0.4286 5.5 8glv-a1-m1-cGi_8glv-a1-m1-cGa
14 3kor-a2-m1-cB 97 43 0.1714 0.1237 0.2791 5.6 3kor-a2-m1-cC_3kor-a2-m1-cB
15 4hes-a3-m2-cE 256 61 0.2714 0.0742 0.3115 6.8 4hes-a3-m1-cE_4hes-a3-m2-cE
16 4hes-a3-m1-cE 256 61 0.2714 0.0742 0.3115 6.8 4hes-a3-m1-cE_4hes-a3-m2-cE
17 4gqm-a1-m2-cA 105 32 0.1714 0.1143 0.3750 7.6 4gqm-a1-m1-cA_4gqm-a1-m2-cA
18 4gqm-a1-m1-cA 105 32 0.1714 0.1143 0.3750 7.6 4gqm-a1-m1-cA_4gqm-a1-m2-cA
19 2r1j-a1-m1-cR 66 52 0.1857 0.1970 0.2500 8.3 2r1j-a1-m1-cL_2r1j-a1-m1-cR
20 2r1j-a1-m1-cL 66 52 0.1857 0.1970 0.2500 8.3 2r1j-a1-m1-cL_2r1j-a1-m1-cR

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Reference:
Jacob Schwartz et al.

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