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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=50)
PLLTKREREVFELLVQDKVRNHISNAMQKLGVKGRSQAVVELLRMGELEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1fse-a2-m1-cF 50 50 1.0000 1.0000 1.0000 5.96e-30 1fse-a2-m1-cF_1fse-a2-m1-cC
2 1fse-a2-m1-cC 67 65 1.0000 0.7463 0.7692 1.91e-26 1fse-a2-m1-cF_1fse-a2-m1-cC
3 1fse-a3-m1-cD 66 65 1.0000 0.7576 0.7692 2.39e-26 1fse-a3-m1-cE_1fse-a3-m1-cD
4 1fse-a3-m1-cE 64 64 0.9800 0.7656 0.7656 4.51e-25 1fse-a3-m1-cE_1fse-a3-m1-cD
5 7x1k-a1-m1-cB 68 64 0.4400 0.3235 0.3438 1.54e-05 7x1k-a1-m1-cB_7x1k-a1-m1-cA
6 7x1k-a1-m1-cA 69 64 0.4400 0.3188 0.3438 1.66e-05 7x1k-a1-m1-cB_7x1k-a1-m1-cA
7 4wuh-a1-m1-cB 68 59 0.3800 0.2794 0.3220 7.87e-04 4wuh-a1-m1-cA_4wuh-a1-m1-cB
8 4wuh-a1-m1-cA 68 59 0.3800 0.2794 0.3220 7.87e-04 4wuh-a1-m1-cA_4wuh-a1-m1-cB
9 4ldz-a1-m1-cA 196 53 0.4000 0.1020 0.3774 0.021 4ldz-a1-m1-cB_4ldz-a1-m1-cA
10 5hev-a2-m1-cC 210 59 0.3600 0.0857 0.3051 0.026 5hev-a2-m1-cB_5hev-a2-m1-cC
11 5hev-a2-m1-cB 209 59 0.3600 0.0861 0.3051 0.027 5hev-a2-m1-cB_5hev-a2-m1-cC
12 4if4-a3-m1-cC 208 54 0.3400 0.0817 0.3148 0.065 4if4-a3-m1-cB_4if4-a3-m1-cC
13 4if4-a3-m1-cB 208 54 0.3400 0.0817 0.3148 0.065 4if4-a3-m1-cB_4if4-a3-m1-cC
14 4if4-a1-m1-cD 208 54 0.3400 0.0817 0.3148 0.065 4if4-a1-m1-cB_4if4-a1-m1-cD
15 4if4-a1-m1-cB 208 54 0.3400 0.0817 0.3148 0.065 4if4-a1-m1-cA_4if4-a1-m1-cB, 4if4-a1-m1-cB_4if4-a1-m1-cD
16 4if4-a1-m1-cA 208 54 0.3400 0.0817 0.3148 0.065 4if4-a1-m1-cA_4if4-a1-m1-cB
17 4ldz-a1-m1-cB 188 48 0.3800 0.1011 0.3958 0.16 4ldz-a1-m1-cB_4ldz-a1-m1-cA
18 3c3w-a1-m1-cB 210 28 0.2200 0.0524 0.3929 0.76 3c3w-a1-m1-cB_3c3w-a1-m1-cA
19 3c3w-a1-m1-cA 211 28 0.2200 0.0521 0.3929 0.78 3c3w-a1-m1-cB_3c3w-a1-m1-cA
20 3c57-a1-m1-cB 49 25 0.1800 0.1837 0.3600 4.8 3c57-a1-m1-cB_3c57-a1-m1-cA
21 3c57-a1-m1-cA 51 25 0.1800 0.1765 0.3600 5.4 3c57-a1-m1-cB_3c57-a1-m1-cA
22 1zlj-a4-m1-cG 67 28 0.2200 0.1642 0.3929 8.1 1zlj-a4-m1-cH_1zlj-a4-m1-cG
23 7v98-a1-m1-cB 386 17 0.2000 0.0259 0.5882 8.2 7v98-a1-m1-cA_7v98-a1-m1-cB
24 7v98-a1-m1-cA 386 17 0.2000 0.0259 0.5882 8.3 7v98-a1-m1-cA_7v98-a1-m1-cB
25 7v9r-a1-m1-cB 520 17 0.2000 0.0192 0.5882 8.4 7v9r-a1-m1-cC_7v9r-a1-m1-cB
26 7v9r-a1-m1-cC 516 16 0.2000 0.0194 0.6250 8.6 7v9r-a1-m1-cC_7v9r-a1-m1-cB
27 1zlj-a4-m1-cH 64 28 0.2200 0.1719 0.3929 9.1 1zlj-a4-m1-cH_1zlj-a4-m1-cG

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Reference:
Jacob Schwartz et al.

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