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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
PLPQAQTPVSLNEASLEELALPGIGPVLARRIVEGRPYARVEDLLKVKGIGPATLERLRP
YLRP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2duy-a2-m2-cA 64 64 1.0000 1.0000 1.0000 8.54e-39 2duy-a2-m1-cA_2duy-a2-m2-cA
2 2duy-a2-m1-cA 64 64 1.0000 1.0000 1.0000 8.54e-39 2duy-a2-m1-cA_2duy-a2-m2-cA
3 8dss-a1-m1-cB 128 59 0.5156 0.2578 0.5593 2.46e-12 8dss-a1-m1-cA_8dss-a1-m1-cB
4 1x2i-a1-m1-cB 68 45 0.2656 0.2500 0.3778 1.0 1x2i-a1-m1-cA_1x2i-a1-m1-cB
5 1x2i-a1-m1-cA 68 45 0.2656 0.2500 0.3778 1.0 1x2i-a1-m1-cA_1x2i-a1-m1-cB
6 2a1j-a2-m2-cB 79 31 0.2344 0.1899 0.4839 2.0 2a1j-a2-m1-cB_2a1j-a2-m2-cB
7 2a1j-a2-m1-cB 79 31 0.2344 0.1899 0.4839 2.0 2a1j-a2-m1-cB_2a1j-a2-m2-cB
8 3llx-a1-m2-cA 365 36 0.2031 0.0356 0.3611 3.5 3llx-a1-m1-cA_3llx-a1-m2-cA
9 3llx-a1-m1-cA 365 36 0.2031 0.0356 0.3611 3.5 3llx-a1-m1-cA_3llx-a1-m2-cA
10 3vdp-a1-m1-cA 197 18 0.1562 0.0508 0.5556 7.0 3vdp-a1-m1-cB_3vdp-a1-m1-cA
11 3vdp-a1-m1-cB 195 18 0.1562 0.0513 0.5556 7.8 3vdp-a1-m1-cB_3vdp-a1-m1-cA
12 4p76-a1-m2-cB 219 27 0.1406 0.0411 0.3333 7.9 4p76-a1-m1-cB_4p76-a1-m2-cB
13 4p76-a1-m1-cB 219 27 0.1406 0.0411 0.3333 7.9 4p76-a1-m1-cB_4p76-a1-m2-cB
14 1szp-a2-m5-cC 274 25 0.1719 0.0401 0.4400 8.8 1szp-a2-m5-cB_1szp-a2-m5-cC
15 1szp-a2-m5-cB 274 25 0.1719 0.0401 0.4400 8.8 1szp-a2-m5-cB_1szp-a2-m5-cC

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Reference:
Jacob Schwartz et al.

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