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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
PLSDAEIQKYREEINRLDREILDAVKRRTKISQTIGKTRMSSGGTRLVHTREVAIINQFR
EEIGEEGPALAGILLRMGRGKLG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5hud-a1-m1-cH 83 83 1.0000 1.0000 1.0000 6.23e-55 5hud-a1-m1-cG_5hud-a1-m1-cH
2 5hud-a1-m1-cG 83 83 1.0000 1.0000 1.0000 6.23e-55 5hud-a1-m1-cG_5hud-a1-m1-cH
3 2w1a-a1-m2-cD 79 66 0.4578 0.4810 0.5758 3.26e-19 2w1a-a1-m1-cD_2w1a-a1-m2-cD
4 2w1a-a1-m1-cD 79 66 0.4578 0.4810 0.5758 3.26e-19 2w1a-a1-m1-cD_2w1a-a1-m2-cD
5 1ybz-a2-m2-cA 76 29 0.1446 0.1579 0.4138 0.090 1ybz-a2-m1-cA_1ybz-a2-m2-cA
6 1ybz-a2-m1-cA 76 29 0.1446 0.1579 0.4138 0.090 1ybz-a2-m1-cA_1ybz-a2-m2-cA
7 2d8d-a1-m1-cA 80 37 0.1687 0.1750 0.3784 0.14 2d8d-a1-m1-cA_2d8d-a1-m1-cB
8 2d8d-a1-m1-cB 83 46 0.1928 0.1928 0.3478 0.15 2d8d-a1-m1-cA_2d8d-a1-m1-cB
9 1dmx-a1-m1-cB 237 33 0.1325 0.0464 0.3333 1.8 1dmx-a1-m1-cA_1dmx-a1-m1-cB
10 1dmx-a1-m1-cA 237 33 0.1325 0.0464 0.3333 1.8 1dmx-a1-m1-cA_1dmx-a1-m1-cB
11 2ism-a1-m1-cB 333 61 0.2048 0.0511 0.2787 6.3 2ism-a1-m1-cA_2ism-a1-m1-cB
12 2ism-a1-m1-cA 327 61 0.2048 0.0520 0.2787 6.5 2ism-a1-m1-cA_2ism-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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