Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=79)
PLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESL
RSKVDEAVAVLQAHQAKEA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3pkn-a2-m2-cA 79 79 1.0000 1.0000 1.0000 8.28e-52 3pkn-a2-m1-cA_3pkn-a2-m2-cA
2 3pkn-a2-m1-cA 79 79 1.0000 1.0000 1.0000 8.28e-52 3pkn-a2-m1-cA_3pkn-a2-m2-cA
3 4ive-a1-m1-cB 73 75 0.8608 0.9315 0.9067 3.84e-36 4ive-a1-m1-cD_4ive-a1-m1-cB
4 4ive-a3-m1-cD 72 74 0.8481 0.9306 0.9054 1.47e-35 4ive-a3-m1-cC_4ive-a3-m1-cD
5 4ive-a3-m1-cC 72 74 0.8481 0.9306 0.9054 1.47e-35 4ive-a3-m1-cC_4ive-a3-m1-cD
6 4ive-a1-m1-cD 72 74 0.8481 0.9306 0.9054 1.47e-35 4ive-a1-m1-cA_4ive-a1-m1-cD, 4ive-a1-m1-cD_4ive-a1-m1-cB
7 4ive-a1-m1-cA 72 73 0.8354 0.9167 0.9041 8.17e-35 4ive-a1-m1-cA_4ive-a1-m1-cD
8 6h7b-a1-m1-cC 77 75 0.4304 0.4416 0.4533 6.95e-15 6h7b-a1-m1-cC_6h7b-a1-m1-cA
9 6h7b-a1-m1-cA 78 76 0.4304 0.4359 0.4474 7.44e-15 6h7b-a1-m1-cC_6h7b-a1-m1-cA
10 3ppu-a1-m1-cB 294 50 0.2152 0.0578 0.3400 1.6 3ppu-a1-m1-cB_3ppu-a1-m1-cA
11 3ppu-a1-m1-cA 309 50 0.2152 0.0550 0.3400 1.6 3ppu-a1-m1-cB_3ppu-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600