Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
PLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESL
RSKVDEAVAVLQAHQAKEA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3pkn-a2-m2-cA 79 79 1.0000 1.0000 1.0000 8.28e-52 3pkn-a2-m1-cA_3pkn-a2-m2-cA
2 3pkn-a2-m1-cA 79 79 1.0000 1.0000 1.0000 8.28e-52 3pkn-a2-m1-cA_3pkn-a2-m2-cA
3 4ive-a1-m1-cB 73 75 0.8608 0.9315 0.9067 3.84e-36 4ive-a1-m1-cD_4ive-a1-m1-cB
4 4ive-a3-m1-cD 72 74 0.8481 0.9306 0.9054 1.47e-35 4ive-a3-m1-cC_4ive-a3-m1-cD
5 4ive-a3-m1-cC 72 74 0.8481 0.9306 0.9054 1.47e-35 4ive-a3-m1-cC_4ive-a3-m1-cD
6 4ive-a1-m1-cD 72 74 0.8481 0.9306 0.9054 1.47e-35 4ive-a1-m1-cA_4ive-a1-m1-cD, 4ive-a1-m1-cD_4ive-a1-m1-cB
7 4ive-a1-m1-cA 72 73 0.8354 0.9167 0.9041 8.17e-35 4ive-a1-m1-cA_4ive-a1-m1-cD
8 6h7b-a1-m1-cC 77 75 0.4304 0.4416 0.4533 6.95e-15 6h7b-a1-m1-cC_6h7b-a1-m1-cA
9 6h7b-a1-m1-cA 78 76 0.4304 0.4359 0.4474 7.44e-15 6h7b-a1-m1-cC_6h7b-a1-m1-cA
10 3ppu-a1-m1-cB 294 50 0.2152 0.0578 0.3400 1.6 3ppu-a1-m1-cB_3ppu-a1-m1-cA
11 3ppu-a1-m1-cA 309 50 0.2152 0.0550 0.3400 1.6 3ppu-a1-m1-cB_3ppu-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600