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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
PLTDLNQLPVQVSFEVGRQILDWHTLTSLEPGSLIDLTTPVDGEVRLLANGRLLGHGRLV
EIQGRLGVRIERLTEVTISLEVLFQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3uep-a1-m1-cB 85 85 1.0000 1.0000 1.0000 6.10e-55 3uep-a1-m1-cA_3uep-a1-m1-cB
2 3uep-a1-m1-cA 85 85 1.0000 1.0000 1.0000 6.10e-55 3uep-a1-m1-cA_3uep-a1-m1-cB
3 1yab-a3-m2-cA 85 77 0.2824 0.2824 0.3117 4.52e-05 1yab-a3-m2-cA_1yab-a3-m2-cB
4 1yab-a3-m1-cA 85 77 0.2824 0.2824 0.3117 4.52e-05 1yab-a3-m1-cA_1yab-a3-m2-cB
5 1yab-a3-m2-cB 87 79 0.2824 0.2759 0.3038 4.54e-05 1yab-a3-m1-cA_1yab-a3-m2-cB, 1yab-a3-m2-cA_1yab-a3-m2-cB
6 1o9y-a1-m1-cD 72 69 0.2353 0.2778 0.2899 5.10e-04 1o9y-a1-m1-cA_1o9y-a1-m1-cD
7 1o9y-a1-m1-cB 71 69 0.2353 0.2817 0.2899 5.39e-04 1o9y-a1-m1-cA_1o9y-a1-m1-cB
8 1o9y-a1-m1-cA 71 69 0.2353 0.2817 0.2899 5.39e-04 1o9y-a1-m1-cA_1o9y-a1-m1-cB, 1o9y-a1-m1-cA_1o9y-a1-m1-cD
9 4yxb-a1-m1-cA 157 67 0.2588 0.1401 0.3284 0.025 4yxb-a1-m1-cA_4yxb-a1-m1-cB
10 4yx1-a1-m1-cB 65 47 0.2471 0.3231 0.4468 0.034 4yx1-a1-m1-cB_4yx1-a1-m1-cA
11 4yxb-a1-m1-cB 169 67 0.2588 0.1302 0.3284 0.038 4yxb-a1-m1-cA_4yxb-a1-m1-cB
12 4yx1-a1-m1-cA 66 47 0.2471 0.3182 0.4468 0.042 4yx1-a1-m1-cB_4yx1-a1-m1-cA
13 4tt9-a2-m1-cC 72 67 0.2000 0.2361 0.2537 0.092 4tt9-a2-m1-cD_4tt9-a2-m1-cC
14 3dd6-a1-m6-cA 244 49 0.1765 0.0615 0.3061 4.2 3dd6-a1-m1-cA_3dd6-a1-m6-cA, 3dd6-a1-m2-cA_3dd6-a1-m6-cA
15 3dd6-a1-m2-cA 244 49 0.1765 0.0615 0.3061 4.2 3dd6-a1-m2-cA_3dd6-a1-m6-cA
16 3dd6-a1-m1-cA 244 49 0.1765 0.0615 0.3061 4.2 3dd6-a1-m1-cA_3dd6-a1-m6-cA
17 1oyp-a1-m1-cF 226 35 0.1647 0.0619 0.4000 4.3 1oyp-a1-m1-cE_1oyp-a1-m1-cF
18 1oyp-a1-m1-cE 226 35 0.1647 0.0619 0.4000 4.3 1oyp-a1-m1-cE_1oyp-a1-m1-cF
19 1oyp-a1-m1-cC 226 35 0.1647 0.0619 0.4000 4.3 1oyp-a1-m1-cB_1oyp-a1-m1-cC
20 1oyp-a1-m1-cB 226 35 0.1647 0.0619 0.4000 4.3 1oyp-a1-m1-cB_1oyp-a1-m1-cC
21 4tt9-a2-m1-cD 68 57 0.1765 0.2206 0.2632 6.7 4tt9-a2-m1-cD_4tt9-a2-m1-cC
22 3gzb-a4-m1-cH 130 34 0.1294 0.0846 0.3235 9.5 3gzb-a4-m1-cH_3gzb-a4-m1-cG

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Reference:
Jacob Schwartz et al.

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