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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
PLVDRLSALQNILSETPGIRLRALSWDAAGNRLQLDIAAVSSRALEQFTQRAQPRFRVRP
GEGQLTLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5hl8-a1-m1-cD 68 68 1.0000 1.0000 1.0000 2.66e-43 5hl8-a1-m1-cD_5hl8-a1-m1-cA
2 5hl8-a1-m1-cA 80 76 1.0000 0.8500 0.8947 1.91e-40 5hl8-a1-m1-cD_5hl8-a1-m1-cA
3 8a9w-a1-m2-cA 75 74 0.6912 0.6267 0.6351 8.92e-25 8a9w-a1-m1-cA_8a9w-a1-m2-cA
4 8a9w-a1-m1-cA 75 74 0.6912 0.6267 0.6351 8.92e-25 8a9w-a1-m1-cA_8a9w-a1-m2-cA
5 1knb-a1-m3-cA 186 50 0.2059 0.0753 0.2800 3.3 1knb-a1-m2-cA_1knb-a1-m3-cA
6 1knb-a1-m2-cA 186 50 0.2059 0.0753 0.2800 3.3 1knb-a1-m2-cA_1knb-a1-m3-cA
7 5ez3-a2-m1-cD 541 19 0.1471 0.0185 0.5263 4.6 5ez3-a2-m1-cC_5ez3-a2-m1-cD
8 5ez3-a2-m1-cC 541 19 0.1471 0.0185 0.5263 4.6 5ez3-a2-m1-cC_5ez3-a2-m1-cD
9 7x0q-a1-m1-cB 357 16 0.1176 0.0224 0.5000 7.2 7x0q-a1-m1-cB_7x0q-a1-m1-cA
10 7x0q-a1-m1-cA 362 16 0.1176 0.0221 0.5000 7.7 7x0q-a1-m1-cB_7x0q-a1-m1-cA
11 3dsh-a1-m2-cA 236 27 0.1618 0.0466 0.4074 8.1 3dsh-a1-m1-cA_3dsh-a1-m2-cA
12 3dsh-a1-m1-cA 236 27 0.1618 0.0466 0.4074 8.1 3dsh-a1-m1-cA_3dsh-a1-m2-cA
13 6szi-a1-m1-cA 1276 44 0.2059 0.0110 0.3182 9.1 6szi-a1-m1-cB_6szi-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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