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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=22)
PLVNIYNCSGVQVGDNNYLTMQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7dac-a1-m1-cD 29 22 1.0000 0.7586 1.0000 2.03e-10 7dac-a1-m1-cC_7dac-a1-m1-cD
2 7dac-a1-m1-cC 29 22 1.0000 0.7586 1.0000 2.03e-10 7dac-a1-m1-cC_7dac-a1-m1-cD
3 7da4-a1-m1-cC 22 22 1.0000 1.0000 1.0000 3.40e-10 7da4-a1-m1-cB_7da4-a1-m1-cC
4 7da4-a1-m1-cB 22 22 1.0000 1.0000 1.0000 3.40e-10 7da4-a1-m1-cB_7da4-a1-m1-cC
5 5v7z-a1-m1-cG 15 15 0.6818 1.0000 1.0000 7.22e-05 5v7z-a1-m1-cE_5v7z-a1-m1-cG
6 5v7z-a1-m1-cE 15 15 0.6818 1.0000 1.0000 7.22e-05 5v7z-a1-m1-cE_5v7z-a1-m1-cG
7 8ib0-a1-m1-cE 24 15 0.3636 0.3333 0.5333 0.31 8ib0-a1-m1-cD_8ib0-a1-m1-cE
8 8ib0-a1-m1-cD 24 15 0.3636 0.3333 0.5333 0.31 8ib0-a1-m1-cD_8ib0-a1-m1-cE
9 5v7z-a1-m1-cH 18 17 0.3636 0.4444 0.4706 1.2 5v7z-a1-m1-cF_5v7z-a1-m1-cH
10 5v7z-a1-m1-cF 18 17 0.3636 0.4444 0.4706 1.2 5v7z-a1-m1-cF_5v7z-a1-m1-cH
11 1pix-a2-m2-cB 586 12 0.3636 0.0137 0.6667 6.3 1pix-a2-m1-cA_1pix-a2-m2-cB, 1pix-a2-m1-cB_1pix-a2-m2-cB, 1pix-a2-m2-cA_1pix-a2-m2-cB
12 1pix-a2-m2-cA 586 12 0.3636 0.0137 0.6667 6.3 1pix-a2-m2-cA_1pix-a2-m2-cB
13 1pix-a2-m1-cB 586 12 0.3636 0.0137 0.6667 6.3 1pix-a2-m1-cB_1pix-a2-m2-cB
14 1pix-a2-m1-cA 586 12 0.3636 0.0137 0.6667 6.3 1pix-a2-m1-cA_1pix-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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