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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
PNAKVIRELREEVEKLREQLSQAEAMKAELKEKLEESEKLIKELTVTWEEKLRKTEAIAQ
ERQRQLESMGISLETSG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5djn-a1-m1-cC 81 77 1.0000 0.9506 1.0000 2.60e-46 5djn-a1-m1-cA_5djn-a1-m1-cC
2 5djn-a1-m1-cA 77 77 1.0000 1.0000 1.0000 2.62e-46 5djn-a1-m1-cA_5djn-a1-m1-cC
3 5djo-a1-m1-cB 160 54 0.6883 0.3312 0.9815 4.08e-27 5djo-a1-m1-cA_5djo-a1-m1-cB
4 5djo-a1-m1-cA 158 53 0.6753 0.3291 0.9811 1.94e-26 5djo-a1-m1-cA_5djo-a1-m1-cB
5 4egx-a2-m1-cD 173 46 0.3247 0.1445 0.5435 5.48e-09 4egx-a2-m1-cD_4egx-a2-m1-cC
6 4egx-a2-m1-cC 174 46 0.3247 0.1437 0.5435 5.61e-09 4egx-a2-m1-cD_4egx-a2-m1-cC
7 7d8v-a1-m2-cA 365 22 0.2208 0.0466 0.7727 1.54e-05 7d8v-a1-m1-cA_7d8v-a1-m2-cA
8 7d8v-a1-m1-cA 365 22 0.2208 0.0466 0.7727 1.54e-05 7d8v-a1-m1-cA_7d8v-a1-m2-cA
9 3kdk-a1-m1-cA 186 62 0.2727 0.1129 0.3387 0.12 3kdk-a1-m1-cB_3kdk-a1-m1-cA
10 3kdk-a1-m1-cB 184 62 0.2727 0.1141 0.3387 0.12 3kdk-a1-m1-cB_3kdk-a1-m1-cA
11 7z8f-a1-m1-cm 4562 56 0.1948 0.0033 0.2679 0.50 7z8f-a1-m1-cm_7z8f-a1-m1-cf, 7z8f-a1-m1-cm_7z8f-a1-m1-cn
12 7z8f-a1-m1-cn 4566 56 0.1948 0.0033 0.2679 0.50 7z8f-a1-m1-cm_7z8f-a1-m1-cn
13 7z8f-a1-m1-cf 4579 56 0.1948 0.0033 0.2679 0.50 7z8f-a1-m1-ce_7z8f-a1-m1-cf, 7z8f-a1-m1-cm_7z8f-a1-m1-cf
14 7z8f-a1-m1-ce 4579 56 0.1948 0.0033 0.2679 0.50 7z8f-a1-m1-ce_7z8f-a1-m1-cf
15 5hyt-a2-m1-cG 29 24 0.1558 0.4138 0.5000 2.7 5hyt-a2-m1-cE_5hyt-a2-m1-cG
16 5hyt-a2-m1-cE 28 24 0.1558 0.4286 0.5000 2.9 5hyt-a2-m1-cE_5hyt-a2-m1-cG
17 5jvm-a1-m1-cB 79 63 0.2597 0.2532 0.3175 3.0 5jvm-a1-m1-cB_5jvm-a1-m1-cA
18 5jvm-a1-m1-cA 82 63 0.2597 0.2439 0.3175 3.2 5jvm-a1-m1-cB_5jvm-a1-m1-cA
19 2c6x-a2-m1-cD 363 48 0.2208 0.0468 0.3542 3.2 2c6x-a2-m1-cC_2c6x-a2-m1-cD
20 2c6x-a2-m1-cC 363 48 0.2208 0.0468 0.3542 3.2 2c6x-a2-m1-cC_2c6x-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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