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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
PNILYKIDNQYPYFTKNEKKIAQFILNYPHKVVNTSQEIANQLETSSTSIIRLSKKVTPG
GFNELKTRLSKFLPKEVTQYNNKLHSR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3iwf-a1-m1-cA 87 87 1.0000 1.0000 1.0000 2.70e-59 3iwf-a1-m1-cA_3iwf-a1-m1-cB
2 3iwf-a1-m1-cB 88 88 1.0000 0.9886 0.9886 1.55e-57 3iwf-a1-m1-cA_3iwf-a1-m1-cB
3 4ivn-a1-m1-cB 261 83 0.2069 0.0690 0.2169 5.08e-04 4ivn-a1-m1-cB_4ivn-a1-m1-cA
4 6jpf-a1-m1-cB 610 69 0.2529 0.0361 0.3188 0.002 6jpf-a1-m1-cA_6jpf-a1-m1-cB
5 6jpf-a1-m1-cA 610 69 0.2529 0.0361 0.3188 0.002 6jpf-a1-m1-cA_6jpf-a1-m1-cB
6 4ivn-a1-m1-cA 264 70 0.1954 0.0644 0.2429 0.003 4ivn-a1-m1-cB_4ivn-a1-m1-cA
7 6rt8-a4-m1-cG 313 44 0.1724 0.0479 0.3409 0.070 6rt8-a4-m1-cG_6rt8-a4-m1-cH
8 6rt8-a4-m1-cH 314 44 0.1724 0.0478 0.3409 0.076 6rt8-a4-m1-cG_6rt8-a4-m1-cH
9 4ju5-a1-m1-cA 200 36 0.1609 0.0700 0.3889 0.23 4ju5-a1-m1-cB_4ju5-a1-m1-cA
10 4ju5-a1-m1-cB 197 36 0.1609 0.0711 0.3889 0.23 4ju5-a1-m1-cB_4ju5-a1-m1-cA
11 3i47-a2-m3-cA 259 76 0.2644 0.0888 0.3026 1.6 3i47-a2-m2-cA_3i47-a2-m3-cA
12 3i47-a2-m2-cA 259 76 0.2644 0.0888 0.3026 1.6 3i47-a2-m2-cA_3i47-a2-m3-cA
13 5dcm-a1-m1-cA 97 58 0.1954 0.1753 0.2931 1.8 5dcm-a1-m1-cA_5dcm-a1-m1-cB
14 5dcm-a1-m1-cB 98 58 0.1954 0.1735 0.2931 1.8 5dcm-a1-m1-cA_5dcm-a1-m1-cB
15 6rs4-a1-m1-cB 315 42 0.1609 0.0444 0.3333 1.8 6rs4-a1-m1-cA_6rs4-a1-m1-cB
16 6rs4-a1-m1-cA 314 42 0.1609 0.0446 0.3333 1.9 6rs4-a1-m1-cA_6rs4-a1-m1-cB
17 3p47-a1-m3-cA 270 84 0.2529 0.0815 0.2619 4.4 3p47-a1-m2-cA_3p47-a1-m3-cA
18 3p47-a1-m2-cA 270 84 0.2529 0.0815 0.2619 4.4 3p47-a1-m2-cA_3p47-a1-m3-cA
19 6rj8-a1-m2-cA 316 42 0.1494 0.0411 0.3095 4.9 6rj8-a1-m1-cA_6rj8-a1-m2-cA
20 6rj8-a1-m1-cA 316 42 0.1494 0.0411 0.3095 4.9 6rj8-a1-m1-cA_6rj8-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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