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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
PNILYKIDNQYPYFTKNEKKIAQFILNYPHKVVNTSQEIANQLETSSTSIIRLSKKVTPG
GFNELKTRLSKFLPKEVTQYNVNKLHSR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3iwf-a1-m1-cB 88 88 1.0000 1.0000 1.0000 4.80e-60 3iwf-a1-m1-cA_3iwf-a1-m1-cB
2 3iwf-a1-m1-cA 87 88 0.9886 1.0000 0.9886 1.57e-57 3iwf-a1-m1-cA_3iwf-a1-m1-cB
3 4ivn-a1-m1-cB 261 81 0.2045 0.0690 0.2222 5.56e-04 4ivn-a1-m1-cB_4ivn-a1-m1-cA
4 4ivn-a1-m1-cA 264 70 0.1932 0.0644 0.2429 0.003 4ivn-a1-m1-cB_4ivn-a1-m1-cA
5 6jpf-a1-m1-cB 610 66 0.2386 0.0344 0.3182 0.006 6jpf-a1-m1-cA_6jpf-a1-m1-cB
6 6jpf-a1-m1-cA 610 66 0.2386 0.0344 0.3182 0.006 6jpf-a1-m1-cA_6jpf-a1-m1-cB
7 6rt8-a4-m1-cG 313 44 0.1705 0.0479 0.3409 0.070 6rt8-a4-m1-cG_6rt8-a4-m1-cH
8 6rt8-a4-m1-cH 314 44 0.1705 0.0478 0.3409 0.076 6rt8-a4-m1-cG_6rt8-a4-m1-cH
9 3i47-a2-m3-cA 259 76 0.2614 0.0888 0.3026 1.6 3i47-a2-m2-cA_3i47-a2-m3-cA
10 3i47-a2-m2-cA 259 76 0.2614 0.0888 0.3026 1.6 3i47-a2-m2-cA_3i47-a2-m3-cA
11 6rs4-a1-m1-cB 315 42 0.1591 0.0444 0.3333 1.8 6rs4-a1-m1-cA_6rs4-a1-m1-cB
12 6rs4-a1-m1-cA 314 42 0.1591 0.0446 0.3333 1.9 6rs4-a1-m1-cA_6rs4-a1-m1-cB
13 5dcm-a1-m1-cA 97 58 0.1932 0.1753 0.2931 2.0 5dcm-a1-m1-cA_5dcm-a1-m1-cB
14 5dcm-a1-m1-cB 98 58 0.1932 0.1735 0.2931 2.0 5dcm-a1-m1-cA_5dcm-a1-m1-cB
15 7d19-a1-m1-cB 481 33 0.1591 0.0291 0.4242 2.7 7d19-a1-m1-cB_7d19-a1-m1-cA
16 7d19-a1-m1-cA 482 33 0.1591 0.0290 0.4242 2.7 7d19-a1-m1-cB_7d19-a1-m1-cA
17 4ju5-a1-m1-cA 200 33 0.1364 0.0600 0.3636 4.6 4ju5-a1-m1-cB_4ju5-a1-m1-cA
18 4ju5-a1-m1-cB 197 33 0.1364 0.0609 0.3636 4.7 4ju5-a1-m1-cB_4ju5-a1-m1-cA
19 6rj8-a1-m2-cA 316 42 0.1477 0.0411 0.3095 4.9 6rj8-a1-m1-cA_6rj8-a1-m2-cA
20 6rj8-a1-m1-cA 316 42 0.1477 0.0411 0.3095 4.9 6rj8-a1-m1-cA_6rj8-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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