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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
PPALHLVDPQIQLTITDPKVYPIILRLGSNLSLSMARRNLDSLEARAFQSTPIVVQMTKL
ATTEELPDEFVVVTAK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2cme-a2-m1-cD 76 76 1.0000 1.0000 1.0000 2.11e-50 2cme-a2-m1-cC_2cme-a2-m1-cD
2 2cme-a2-m1-cC 76 76 1.0000 1.0000 1.0000 2.11e-50 2cme-a2-m1-cC_2cme-a2-m1-cD
3 7ye8-a2-m1-cC 75 75 0.7895 0.8000 0.8000 1.86e-35 7ye8-a2-m1-cC_7ye8-a2-m1-cD
4 7ye8-a2-m1-cD 78 76 0.7895 0.7692 0.7895 4.14e-35 7ye8-a2-m1-cC_7ye8-a2-m1-cD
5 4oky-a1-m2-cC 279 36 0.1974 0.0538 0.4167 0.79 4oky-a1-m1-cC_4oky-a1-m2-cC
6 4oky-a1-m1-cC 279 36 0.1974 0.0538 0.4167 0.79 4oky-a1-m1-cC_4oky-a1-m2-cC
7 2pgi-a2-m4-cA 442 49 0.2500 0.0430 0.3878 0.84 2pgi-a2-m2-cA_2pgi-a2-m4-cA, 2pgi-a2-m3-cA_2pgi-a2-m4-cA
8 2pgi-a2-m3-cA 442 49 0.2500 0.0430 0.3878 0.84 2pgi-a2-m3-cA_2pgi-a2-m4-cA
9 2pgi-a2-m2-cA 442 49 0.2500 0.0430 0.3878 0.84 2pgi-a2-m2-cA_2pgi-a2-m4-cA
10 6wt6-a1-m2-cA 309 31 0.1579 0.0388 0.3871 7.5 6wt6-a1-m1-cA_6wt6-a1-m2-cA
11 6wt6-a1-m1-cA 309 31 0.1579 0.0388 0.3871 7.5 6wt6-a1-m1-cA_6wt6-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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