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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
PPAPRHLHAQALSDSEIQLTWKHPEALPGPISKYVVEVQVPLWIDVDRPEETSTIIRGLN
ASTRYLFRMRASIQGLGDWSNTVEESTL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5n06-a1-m1-cB 88 88 1.0000 1.0000 1.0000 2.39e-61 5n06-a1-m1-cB_5n06-a1-m1-cA
2 5n06-a1-m1-cA 93 91 1.0000 0.9462 0.9670 4.26e-59 5n06-a1-m1-cB_5n06-a1-m1-cA
3 4bkf-a1-m1-cB 505 92 0.3068 0.0535 0.2935 0.001 4bkf-a1-m1-cA_4bkf-a1-m1-cB
4 4bkf-a1-m1-cA 505 92 0.3068 0.0535 0.2935 0.001 4bkf-a1-m1-cA_4bkf-a1-m1-cB
5 7mrm-a1-m1-cA 365 81 0.2159 0.0521 0.2346 0.007 7mrm-a1-m1-cB_7mrm-a1-m1-cA
6 7mrm-a1-m1-cB 360 81 0.2159 0.0528 0.2346 0.008 7mrm-a1-m1-cB_7mrm-a1-m1-cA
7 7r3n-a2-m1-cC 302 43 0.1364 0.0397 0.2791 0.055 7r3n-a2-m1-cC_7r3n-a2-m1-cD
8 7r3n-a2-m1-cD 305 43 0.1364 0.0393 0.2791 0.057 7r3n-a2-m1-cC_7r3n-a2-m1-cD
9 4yfg-a1-m1-cB 481 34 0.1705 0.0312 0.4412 0.11 4yfg-a1-m1-cA_4yfg-a1-m1-cB
10 4yfg-a1-m1-cA 481 34 0.1705 0.0312 0.4412 0.11 4yfg-a1-m1-cA_4yfg-a1-m1-cB
11 5utk-a1-m1-cB 280 87 0.2841 0.0893 0.2874 0.69 5utk-a1-m1-cB_5utk-a1-m1-cA
12 8avf-a1-m1-cD 596 57 0.1705 0.0252 0.2632 0.78 8avf-a1-m1-cB_8avf-a1-m1-cD
13 8avf-a1-m1-cB 596 57 0.1705 0.0252 0.2632 0.78 8avf-a1-m1-cB_8avf-a1-m1-cD
14 5myb-a1-m1-cA 190 95 0.2955 0.1368 0.2737 1.5 5myb-a1-m1-cA_5myb-a1-m1-cB
15 5fn8-a2-m3-cA 178 27 0.1136 0.0562 0.3704 1.7 5fn8-a2-m1-cA_5fn8-a2-m3-cA
16 5fn8-a2-m1-cA 178 27 0.1136 0.0562 0.3704 1.7 5fn8-a2-m1-cA_5fn8-a2-m3-cA
17 5myb-a1-m1-cB 191 96 0.2955 0.1361 0.2708 2.9 5myb-a1-m1-cA_5myb-a1-m1-cB
18 1p91-a1-m1-cB 251 40 0.1591 0.0558 0.3500 3.5 1p91-a1-m1-cB_1p91-a1-m1-cA
19 6sff-a1-m2-cA 295 43 0.1364 0.0407 0.2791 3.7 6sff-a1-m1-cA_6sff-a1-m2-cA
20 6sff-a1-m1-cA 295 43 0.1364 0.0407 0.2791 3.7 6sff-a1-m1-cA_6sff-a1-m2-cA
21 1p91-a1-m1-cA 261 40 0.1591 0.0536 0.3500 3.7 1p91-a1-m1-cB_1p91-a1-m1-cA
22 7y8s-a1-m1-cA 275 82 0.2500 0.0800 0.2683 5.2 7y8s-a1-m1-cA_7y8s-a1-m1-cB
23 7y8s-a1-m1-cB 288 82 0.2500 0.0764 0.2683 5.5 7y8s-a1-m1-cA_7y8s-a1-m1-cB
24 5utk-a1-m1-cA 289 93 0.2841 0.0865 0.2688 7.8 5utk-a1-m1-cB_5utk-a1-m1-cA
25 5j7k-a2-m1-cB 90 73 0.2386 0.2333 0.2877 8.8 5j7k-a2-m1-cF_5j7k-a2-m1-cB

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Reference:
Jacob Schwartz et al.

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