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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
PPENCQDDFNFNYVSDQEIEVYHVDKGWSAGWNYVCLNDYCLPGNKSNGAFRKTFNAVLG
QDYKLTFKVEDRYGQGQQILDRNITFTTQVCN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2cov-a1-m1-cE 92 92 1.0000 1.0000 1.0000 2.82e-66 2cov-a1-m1-cH_2cov-a1-m1-cE
2 2cov-a1-m1-cI 88 88 0.9565 1.0000 1.0000 1.32e-62 2cov-a1-m1-cH_2cov-a1-m1-cI
3 2cov-a1-m1-cH 87 87 0.9457 1.0000 1.0000 6.65e-62 2cov-a1-m1-cF_2cov-a1-m1-cH, 2cov-a1-m1-cH_2cov-a1-m1-cE, 2cov-a1-m1-cH_2cov-a1-m1-cI
4 2cov-a1-m1-cF 87 87 0.9457 1.0000 1.0000 6.65e-62 2cov-a1-m1-cF_2cov-a1-m1-cH
5 2np0-a2-m2-cA 1289 25 0.1196 0.0085 0.4400 2.5 2np0-a2-m1-cA_2np0-a2-m2-cA
6 2np0-a2-m1-cA 1289 25 0.1196 0.0085 0.4400 2.5 2np0-a2-m1-cA_2np0-a2-m2-cA
7 4g1e-a3-m2-cB 709 38 0.1413 0.0183 0.3421 3.1 4g1e-a3-m1-cB_4g1e-a3-m2-cB
8 4g1e-a3-m1-cB 709 38 0.1413 0.0183 0.3421 3.1 4g1e-a3-m1-cB_4g1e-a3-m2-cB
9 1bg1-a1-m2-cA 558 11 0.0978 0.0161 0.8182 5.3 1bg1-a1-m1-cA_1bg1-a1-m2-cA
10 1bg1-a1-m1-cA 558 11 0.0978 0.0161 0.8182 5.3 1bg1-a1-m1-cA_1bg1-a1-m2-cA
11 6tlc-a1-m1-cA 533 11 0.0978 0.0169 0.8182 5.8 6tlc-a1-m1-cA_6tlc-a1-m1-cB
12 6tlc-a1-m1-cB 535 11 0.0978 0.0168 0.8182 5.8 6tlc-a1-m1-cA_6tlc-a1-m1-cB
13 7mqs-a1-m1-cF 811 37 0.1304 0.0148 0.3243 7.8 7mqs-a1-m1-cE_7mqs-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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