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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=22)
PPGPPGPPGGPPGPPGPPGPPG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2d3h-a2-m1-cF 22 22 1.0000 1.0000 1.0000 0.007 2d3h-a2-m1-cF_2d3h-a2-m1-cD
2 2d3h-a2-m1-cD 23 22 1.0000 0.9565 1.0000 0.008 2d3h-a2-m1-cF_2d3h-a2-m1-cD
3 3a19-a3-m1-cC 24 21 0.9545 0.8750 1.0000 0.032 3a19-a3-m1-cB_3a19-a3-m1-cC
4 3a19-a3-m1-cC 24 22 0.9091 0.8333 0.9091 2.3 3a19-a3-m1-cB_3a19-a3-m1-cC
5 3adm-a1-m1-cC 25 23 1.0000 0.8800 0.9565 0.51 3adm-a1-m1-cC_3adm-a1-m1-cB
6 3adm-a1-m1-cB 26 23 1.0000 0.8462 0.9565 0.55 3adm-a1-m1-cC_3adm-a1-m1-cB
7 3abn-a1-m1-cA 26 23 1.0000 0.8462 0.9565 0.55 3abn-a1-m1-cB_3abn-a1-m1-cA
8 3a0a-a3-m1-cC 23 23 1.0000 0.9565 0.9565 0.57 3a0a-a3-m1-cB_3a0a-a3-m1-cC
9 2d3f-a3-m1-cF 26 23 1.0000 0.8462 0.9565 0.87 2d3f-a3-m1-cE_2d3f-a3-m1-cF
10 2d3f-a3-m1-cE 26 23 1.0000 0.8462 0.9565 0.87 2d3f-a3-m1-cE_2d3f-a3-m1-cF
11 1x1k-a1-m1-cD 26 23 1.0000 0.8462 0.9565 0.87 1x1k-a1-m1-cB_1x1k-a1-m1-cD
12 1x1k-a1-m1-cB 26 23 1.0000 0.8462 0.9565 0.87 1x1k-a1-m1-cB_1x1k-a1-m1-cD
13 3a1h-a1-m1-cC 23 22 0.9545 0.9130 0.9545 1.2 3a1h-a1-m1-cA_3a1h-a1-m1-cC
14 3abn-a1-m1-cB 24 22 0.9545 0.8750 0.9545 1.7 3abn-a1-m1-cB_3abn-a1-m1-cA
15 3a0a-a3-m1-cB 21 21 0.9091 0.9524 0.9524 2.2 3a0a-a3-m1-cB_3a0a-a3-m1-cC
16 3a1h-a1-m1-cA 22 21 0.9091 0.9091 0.9524 2.4 3a1h-a1-m1-cA_3a1h-a1-m1-cC
17 2d3f-a3-m1-cC 25 22 0.9545 0.8400 0.9545 2.7 2d3f-a3-m1-cA_2d3f-a3-m1-cC
18 2d3f-a3-m1-cA 25 22 0.9545 0.8400 0.9545 2.7 2d3f-a3-m1-cA_2d3f-a3-m1-cC

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Reference:
Jacob Schwartz et al.

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