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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=21)
PPGPPGPPGPPGGPPGPPGPP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3a08-a3-m1-cB 21 21 1.0000 1.0000 1.0000 0.019 3a08-a3-m1-cA_3a08-a3-m1-cB
2 3a08-a3-m1-cA 21 21 1.0000 1.0000 1.0000 0.019 3a08-a3-m1-cA_3a08-a3-m1-cB
3 3a19-a3-m1-cB 22 21 1.0000 0.9545 1.0000 0.020 3a19-a3-m1-cB_3a19-a3-m1-cC
4 3a19-a3-m1-cC 24 21 1.0000 0.8750 1.0000 0.028 3a19-a3-m1-cB_3a19-a3-m1-cC
5 3a19-a3-m1-cC 24 21 0.9048 0.7917 0.9048 6.8 3a19-a3-m1-cB_3a19-a3-m1-cC
6 3adm-a1-m1-cB 26 22 1.0000 0.8077 0.9545 1.6 3adm-a1-m1-cC_3adm-a1-m1-cB
7 3abn-a1-m1-cA 26 22 1.0000 0.8077 0.9545 1.6 3abn-a1-m1-cB_3abn-a1-m1-cA
8 2d3f-a3-m1-cC 25 22 1.0000 0.8400 0.9545 2.3 2d3f-a3-m1-cA_2d3f-a3-m1-cC
9 2d3f-a3-m1-cA 25 22 1.0000 0.8400 0.9545 2.3 2d3f-a3-m1-cA_2d3f-a3-m1-cC
10 6rla-a1-m1-cB 2750 13 0.3810 0.0029 0.6154 2.4 6rla-a1-m1-cA_6rla-a1-m1-cB
11 6rla-a1-m1-cA 2750 13 0.3810 0.0029 0.6154 2.4 6rla-a1-m1-cA_6rla-a1-m1-cB
12 2d3f-a3-m1-cF 26 22 1.0000 0.8077 0.9545 2.5 2d3f-a3-m1-cE_2d3f-a3-m1-cF
13 2d3f-a3-m1-cE 26 22 1.0000 0.8077 0.9545 2.5 2d3f-a3-m1-cE_2d3f-a3-m1-cF
14 1x1k-a1-m1-cD 26 22 1.0000 0.8077 0.9545 2.5 1x1k-a1-m1-cB_1x1k-a1-m1-cD
15 1x1k-a1-m1-cB 26 22 1.0000 0.8077 0.9545 2.5 1x1k-a1-m1-cB_1x1k-a1-m1-cD
16 3abn-a1-m1-cB 24 21 0.9524 0.8333 0.9524 3.2 3abn-a1-m1-cB_3abn-a1-m1-cA
17 3adm-a1-m1-cC 25 21 0.9524 0.8000 0.9524 3.5 3adm-a1-m1-cC_3adm-a1-m1-cB
18 3a1h-a1-m1-cA 22 20 0.9048 0.8636 0.9500 5.1 3a1h-a1-m1-cA_3a1h-a1-m1-cC
19 2d3h-a2-m1-cD 23 21 0.9048 0.8261 0.9048 5.4 2d3h-a2-m1-cF_2d3h-a2-m1-cD
20 3a1h-a1-m1-cC 23 20 0.9048 0.8261 0.9500 6.2 3a1h-a1-m1-cA_3a1h-a1-m1-cC
21 7umz-a1-m1-cD 3927 15 0.3810 0.0020 0.5333 7.6 7umz-a1-m1-cC_7umz-a1-m1-cD
22 7umz-a1-m1-cC 3927 15 0.3810 0.0020 0.5333 7.6 7umz-a1-m1-cC_7umz-a1-m1-cD
23 7k0t-a1-m1-cD 4105 15 0.3810 0.0019 0.5333 7.9 7k0t-a1-m1-cC_7k0t-a1-m1-cD
24 7k0t-a1-m1-cC 4105 15 0.3810 0.0019 0.5333 7.9 7k0t-a1-m1-cC_7k0t-a1-m1-cD
25 7m6a-a1-m1-cI 4306 15 0.3810 0.0019 0.5333 9.0 7m6a-a1-m1-cG_7m6a-a1-m1-cI
26 7m6a-a1-m1-cG 4306 15 0.3810 0.0019 0.5333 9.0 7m6a-a1-m1-cG_7m6a-a1-m1-cI
27 7m6l-a1-m1-cI 4299 15 0.3810 0.0019 0.5333 9.0 7m6l-a1-m1-cG_7m6l-a1-m1-cI
28 7m6l-a1-m1-cG 4299 15 0.3810 0.0019 0.5333 9.0 7m6l-a1-m1-cG_7m6l-a1-m1-cI
29 7t64-a1-m1-cD 4247 15 0.3810 0.0019 0.5333 9.0 7t64-a1-m1-cC_7t64-a1-m1-cD
30 7t64-a1-m1-cC 4247 15 0.3810 0.0019 0.5333 9.0 7t64-a1-m1-cC_7t64-a1-m1-cD
31 6wot-a1-m1-cD 4197 15 0.3810 0.0019 0.5333 9.6 6wot-a1-m1-cB_6wot-a1-m1-cD, 6wot-a1-m1-cC_6wot-a1-m1-cD
32 6wot-a1-m1-cC 4197 15 0.3810 0.0019 0.5333 9.6 6wot-a1-m1-cC_6wot-a1-m1-cD
33 6wot-a1-m1-cB 4197 15 0.3810 0.0019 0.5333 9.6 6wot-a1-m1-cB_6wot-a1-m1-cD
34 7tdj-a1-m1-cD 4133 15 0.3810 0.0019 0.5333 9.6 7tdj-a1-m1-cC_7tdj-a1-m1-cD
35 7tdj-a1-m1-cC 4133 15 0.3810 0.0019 0.5333 9.6 7tdj-a1-m1-cC_7tdj-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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