Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=24)
PPGPPGPPGPPGGPPGPPGPPGPP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3a19-a3-m1-cC 24 24 1.0000 1.0000 1.0000 0.003 3a19-a3-m1-cB_3a19-a3-m1-cC
2 3adm-a1-m1-cB 26 25 1.0000 0.9231 0.9600 0.18 3adm-a1-m1-cC_3adm-a1-m1-cB
3 3abn-a1-m1-cA 26 25 1.0000 0.9231 0.9600 0.18 3abn-a1-m1-cB_3abn-a1-m1-cA
4 2d3f-a3-m1-cC 25 25 1.0000 0.9600 0.9600 0.23 2d3f-a3-m1-cA_2d3f-a3-m1-cC
5 2d3f-a3-m1-cA 25 25 1.0000 0.9600 0.9600 0.23 2d3f-a3-m1-cA_2d3f-a3-m1-cC
6 2d3f-a3-m1-cF 26 25 1.0000 0.9231 0.9600 0.25 2d3f-a3-m1-cE_2d3f-a3-m1-cF
7 2d3f-a3-m1-cE 26 25 1.0000 0.9231 0.9600 0.25 2d3f-a3-m1-cE_2d3f-a3-m1-cF
8 1x1k-a1-m1-cD 26 25 1.0000 0.9231 0.9600 0.25 1x1k-a1-m1-cB_1x1k-a1-m1-cD
9 1x1k-a1-m1-cB 26 25 1.0000 0.9231 0.9600 0.25 1x1k-a1-m1-cB_1x1k-a1-m1-cD
10 3abn-a1-m1-cB 24 24 0.9583 0.9583 0.9583 0.29 3abn-a1-m1-cB_3abn-a1-m1-cA
11 3adm-a1-m1-cC 25 24 0.9583 0.9200 0.9583 0.32 3adm-a1-m1-cC_3adm-a1-m1-cB
12 3a1h-a1-m1-cC 23 23 0.9167 0.9565 0.9565 0.62 3a1h-a1-m1-cA_3a1h-a1-m1-cC
13 6rla-a1-m1-cB 2750 13 0.3333 0.0029 0.6154 2.9 6rla-a1-m1-cA_6rla-a1-m1-cB
14 6rla-a1-m1-cA 2750 13 0.3333 0.0029 0.6154 2.9 6rla-a1-m1-cA_6rla-a1-m1-cB
15 7umz-a1-m1-cD 3927 15 0.3333 0.0020 0.5333 9.1 7umz-a1-m1-cC_7umz-a1-m1-cD
16 7umz-a1-m1-cC 3927 15 0.3333 0.0020 0.5333 9.1 7umz-a1-m1-cC_7umz-a1-m1-cD
17 7k0t-a1-m1-cD 4105 15 0.3333 0.0019 0.5333 9.6 7k0t-a1-m1-cC_7k0t-a1-m1-cD
18 7k0t-a1-m1-cC 4105 15 0.3333 0.0019 0.5333 9.6 7k0t-a1-m1-cC_7k0t-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600