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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=25)
PPGPPGPPGPPGPGPPGPPGPPGPP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2d3f-a3-m1-cC 25 25 1.0000 1.0000 1.0000 0.002 2d3f-a3-m1-cA_2d3f-a3-m1-cC
2 2d3f-a3-m1-cA 25 25 1.0000 1.0000 1.0000 0.002 2d3f-a3-m1-cA_2d3f-a3-m1-cC
3 2d3f-a3-m1-cF 26 25 1.0000 0.9615 1.0000 0.002 2d3f-a3-m1-cE_2d3f-a3-m1-cF
4 2d3f-a3-m1-cE 26 25 1.0000 0.9615 1.0000 0.002 2d3f-a3-m1-cE_2d3f-a3-m1-cF
5 1x1k-a1-m1-cD 26 25 1.0000 0.9615 1.0000 0.002 1x1k-a1-m1-cB_1x1k-a1-m1-cD
6 1x1k-a1-m1-cB 26 25 1.0000 0.9615 1.0000 0.002 1x1k-a1-m1-cB_1x1k-a1-m1-cD
7 3a19-a3-m1-cC 24 25 0.9600 1.0000 0.9600 0.24 3a19-a3-m1-cB_3a19-a3-m1-cC

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Reference:
Jacob Schwartz et al.

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