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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
PPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3le4-a1-m2-cA 55 55 1.0000 1.0000 1.0000 6.08e-36 3le4-a1-m1-cA_3le4-a1-m2-cA
2 3le4-a1-m1-cA 55 55 1.0000 1.0000 1.0000 6.08e-36 3le4-a1-m1-cA_3le4-a1-m2-cA
3 5cq2-a1-m4-cA 76 32 0.2182 0.1579 0.3750 0.030 5cq2-a1-m1-cA_5cq2-a1-m4-cA, 5cq2-a1-m2-cA_5cq2-a1-m4-cA, 5cq2-a1-m3-cA_5cq2-a1-m4-cA
4 5cq2-a1-m4-cA 76 31 0.1636 0.1184 0.2903 6.3 5cq2-a1-m1-cA_5cq2-a1-m4-cA, 5cq2-a1-m2-cA_5cq2-a1-m4-cA, 5cq2-a1-m3-cA_5cq2-a1-m4-cA
5 5cq2-a1-m3-cA 76 32 0.2182 0.1579 0.3750 0.030 5cq2-a1-m3-cA_5cq2-a1-m4-cA
6 5cq2-a1-m3-cA 76 31 0.1636 0.1184 0.2903 6.3 5cq2-a1-m3-cA_5cq2-a1-m4-cA
7 5cq2-a1-m2-cA 76 32 0.2182 0.1579 0.3750 0.030 5cq2-a1-m2-cA_5cq2-a1-m4-cA
8 5cq2-a1-m2-cA 76 31 0.1636 0.1184 0.2903 6.3 5cq2-a1-m2-cA_5cq2-a1-m4-cA
9 5cq2-a1-m1-cA 76 32 0.2182 0.1579 0.3750 0.030 5cq2-a1-m1-cA_5cq2-a1-m4-cA
10 5cq2-a1-m1-cA 76 31 0.1636 0.1184 0.2903 6.3 5cq2-a1-m1-cA_5cq2-a1-m4-cA
11 8dhe-a1-m1-cD 660 37 0.2364 0.0197 0.3514 1.5 8dhe-a1-m1-cB_8dhe-a1-m1-cD, 8dhe-a1-m1-cC_8dhe-a1-m1-cD
12 8dhe-a1-m1-cB 660 37 0.2364 0.0197 0.3514 1.5 8dhe-a1-m1-cB_8dhe-a1-m1-cD
13 8dhe-a1-m1-cC 657 37 0.2364 0.0198 0.3514 1.6 8dhe-a1-m1-cC_8dhe-a1-m1-cD
14 7xof-a1-m1-cB 927 40 0.2545 0.0151 0.3500 1.7 7xof-a1-m1-cA_7xof-a1-m1-cB
15 5dws-a1-m1-cA 37 35 0.1818 0.2703 0.2857 2.3 5dws-a1-m1-cE_5dws-a1-m1-cA
16 5dws-a1-m1-cE 35 31 0.1636 0.2571 0.2903 3.9 5dws-a1-m1-cE_5dws-a1-m1-cA
17 4ew7-a1-m2-cA 112 38 0.2545 0.1250 0.3684 4.2 4ew7-a1-m1-cA_4ew7-a1-m2-cA
18 4ew7-a1-m1-cA 112 38 0.2545 0.1250 0.3684 4.2 4ew7-a1-m1-cA_4ew7-a1-m2-cA
19 2rk0-a2-m2-cB 125 16 0.1455 0.0640 0.5000 6.0 2rk0-a2-m2-cB_2rk0-a2-m1-cA, 2rk0-a2-m2-cB_2rk0-a2-m2-cA
20 2rk0-a2-m2-cA 133 16 0.1455 0.0602 0.5000 6.1 2rk0-a2-m1-cA_2rk0-a2-m2-cA, 2rk0-a2-m2-cB_2rk0-a2-m2-cA
21 2rk0-a2-m1-cA 133 16 0.1455 0.0602 0.5000 6.1 2rk0-a2-m1-cA_2rk0-a2-m2-cA, 2rk0-a2-m2-cB_2rk0-a2-m1-cA
22 6j27-a2-m1-cC 343 12 0.1273 0.0204 0.5833 6.5 6j27-a2-m1-cC_6j27-a2-m1-cD
23 6j27-a2-m1-cD 344 12 0.1273 0.0203 0.5833 6.5 6j27-a2-m1-cC_6j27-a2-m1-cD
24 5m45-a2-m1-cJ 762 22 0.1818 0.0131 0.4545 9.4 5m45-a2-m1-cG_5m45-a2-m1-cJ
25 5m45-a2-m1-cG 762 22 0.1818 0.0131 0.4545 9.4 5m45-a2-m1-cG_5m45-a2-m1-cJ
26 3bnu-a1-m1-cA 497 16 0.1455 0.0161 0.5000 9.8 3bnu-a1-m1-cA_3bnu-a1-m1-cB
27 3bnu-a1-m1-cB 499 16 0.1455 0.0160 0.5000 9.8 3bnu-a1-m1-cA_3bnu-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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