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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
PQELQAFKRAKDALEESLLLKDCKCRSRLFPRTWDLRQALEAELALTLKVLEATADTDPA
LGDVLDQPILSQLRACIQSPGCLEASVTFNLFRLLTRD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hhc-a2-m1-cD 98 98 1.0000 1.0000 1.0000 1.88e-65 3hhc-a2-m1-cD_3hhc-a2-m1-cB
2 3hhc-a2-m1-cB 157 136 1.0000 0.6242 0.7206 2.51e-54 3hhc-a2-m1-cD_3hhc-a2-m1-cB
3 2x3c-a1-m2-cA 284 28 0.0918 0.0317 0.3214 7.4 2x3c-a1-m1-cA_2x3c-a1-m2-cA
4 2x3c-a1-m1-cA 284 28 0.0918 0.0317 0.3214 7.4 2x3c-a1-m1-cA_2x3c-a1-m2-cA
5 4e4f-a1-m2-cC 381 69 0.1735 0.0446 0.2464 7.9 4e4f-a1-m2-cC_4e4f-a1-m2-cD
6 4e4f-a1-m2-cB 381 69 0.1735 0.0446 0.2464 7.9 4e4f-a1-m2-cB_4e4f-a1-m2-cD
7 4e4f-a1-m2-cA 386 69 0.1735 0.0440 0.2464 7.9 4e4f-a1-m2-cA_4e4f-a1-m2-cD
8 4e4f-a1-m2-cD 388 69 0.1735 0.0438 0.2464 7.9 4e4f-a1-m2-cA_4e4f-a1-m2-cD, 4e4f-a1-m2-cB_4e4f-a1-m2-cD, 4e4f-a1-m2-cC_4e4f-a1-m2-cD

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Reference:
Jacob Schwartz et al.

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