Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
PQISLWQRPVVTARIGGQLIEVLLDTGADDTVIEDIDLPGKWSPKMIAGIGGFVKVRQYD
QILIEFCGKKAIGSVLVGPTPANVIGRNIMSQIGCTLNF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3t3c-a1-m1-cB 99 99 1.0000 1.0000 1.0000 3.04e-68 3t3c-a1-m1-cA_3t3c-a1-m1-cB
2 3t3c-a1-m1-cA 99 99 1.0000 1.0000 1.0000 3.04e-68 3t3c-a1-m1-cA_3t3c-a1-m1-cB
3 1mt9-a1-m1-cB 99 99 0.7677 0.7677 0.7677 1.22e-55 1mt9-a1-m1-cA_1mt9-a1-m1-cB
4 1mt9-a1-m1-cA 99 99 0.7677 0.7677 0.7677 1.22e-55 1mt9-a1-m1-cA_1mt9-a1-m1-cB
5 4mc2-a1-m1-cB 99 99 0.7677 0.7677 0.7677 1.43e-55 4mc2-a1-m1-cA_4mc2-a1-m1-cB
6 4mc2-a1-m1-cA 99 99 0.7677 0.7677 0.7677 1.43e-55 4mc2-a1-m1-cA_4mc2-a1-m1-cB
7 1ztz-a2-m2-cB 99 99 0.7677 0.7677 0.7677 1.43e-55 1ztz-a2-m1-cA_1ztz-a2-m2-cB, 1ztz-a2-m1-cB_1ztz-a2-m2-cB, 1ztz-a2-m2-cA_1ztz-a2-m2-cB
8 1ztz-a2-m2-cA 99 99 0.7677 0.7677 0.7677 1.43e-55 1ztz-a2-m2-cA_1ztz-a2-m2-cB
9 1ztz-a2-m1-cB 99 99 0.7677 0.7677 0.7677 1.43e-55 1ztz-a2-m1-cB_1ztz-a2-m2-cB
10 1ztz-a2-m1-cA 99 99 0.7677 0.7677 0.7677 1.43e-55 1ztz-a2-m1-cA_1ztz-a2-m2-cB
11 1kj4-a3-m4-cD 99 99 0.7576 0.7576 0.7576 6.86e-55 1kj4-a3-m3-cA_1kj4-a3-m4-cD, 1kj4-a3-m4-cA_1kj4-a3-m4-cD
12 1kj4-a3-m4-cC 99 99 0.7576 0.7576 0.7576 6.86e-55 1kj4-a3-m2-cB_1kj4-a3-m4-cC
13 1kj4-a3-m4-cB 99 99 0.7576 0.7576 0.7576 6.86e-55 1kj4-a3-m2-cB_1kj4-a3-m4-cB
14 1kj4-a3-m4-cA 99 99 0.7576 0.7576 0.7576 6.86e-55 1kj4-a3-m4-cA_1kj4-a3-m4-cD
15 1kj4-a3-m3-cA 99 99 0.7576 0.7576 0.7576 6.86e-55 1kj4-a3-m3-cA_1kj4-a3-m4-cD
16 1kj4-a3-m2-cB 99 99 0.7576 0.7576 0.7576 6.86e-55 1kj4-a3-m2-cB_1kj4-a3-m4-cB, 1kj4-a3-m2-cB_1kj4-a3-m4-cC
17 3oud-a1-m1-cA 99 99 0.7576 0.7576 0.7576 1.01e-54 3oud-a1-m1-cA_3oud-a1-m1-cB
18 3oud-a1-m1-cB 99 99 0.7475 0.7475 0.7475 2.82e-54 3oud-a1-m1-cA_3oud-a1-m1-cB
19 3ttp-a1-m1-cB 99 99 0.7273 0.7273 0.7273 1.10e-53 3ttp-a1-m1-cA_3ttp-a1-m1-cB
20 3ttp-a1-m1-cA 99 99 0.7273 0.7273 0.7273 1.10e-53 3ttp-a1-m1-cA_3ttp-a1-m1-cB
21 6ogt-a1-m2-cA 99 99 0.7374 0.7374 0.7374 2.86e-53 6ogt-a1-m1-cA_6ogt-a1-m2-cA
22 6ogt-a1-m1-cA 99 99 0.7374 0.7374 0.7374 2.86e-53 6ogt-a1-m1-cA_6ogt-a1-m2-cA
23 2rkg-a1-m1-cB 100 100 0.7273 0.7200 0.7200 4.43e-53 2rkg-a1-m1-cA_2rkg-a1-m1-cB
24 2rkg-a1-m1-cA 100 100 0.7273 0.7200 0.7200 4.43e-53 2rkg-a1-m1-cA_2rkg-a1-m1-cB
25 2f80-a2-m4-cB 99 99 0.7374 0.7374 0.7374 6.88e-53 2f80-a2-m1-cA_2f80-a2-m4-cB
26 2f80-a2-m1-cA 99 99 0.7374 0.7374 0.7374 6.88e-53 2f80-a2-m1-cA_2f80-a2-m4-cB
27 3u7s-a1-m1-cB 99 99 0.6970 0.6970 0.6970 1.03e-52 3u7s-a1-m1-cA_3u7s-a1-m1-cB
28 3u7s-a1-m1-cA 99 99 0.6970 0.6970 0.6970 1.03e-52 3u7s-a1-m1-cA_3u7s-a1-m1-cB
29 2p3d-a1-m1-cB 99 99 0.7172 0.7172 0.7172 1.11e-51 2p3d-a1-m1-cA_2p3d-a1-m1-cB
30 2p3d-a1-m1-cA 99 99 0.7172 0.7172 0.7172 1.11e-51 2p3d-a1-m1-cA_2p3d-a1-m1-cB
31 8dch-a1-m1-cB 99 99 0.7374 0.7374 0.7374 3.10e-51 8dch-a1-m1-cA_8dch-a1-m1-cB
32 8dch-a1-m1-cA 99 99 0.7374 0.7374 0.7374 3.10e-51 8dch-a1-m1-cA_8dch-a1-m1-cB
33 3ggu-a1-m1-cB 99 99 0.7071 0.7071 0.7071 8.99e-51 3ggu-a1-m1-cA_3ggu-a1-m1-cB
34 3ggu-a1-m1-cA 99 99 0.7071 0.7071 0.7071 8.99e-51 3ggu-a1-m1-cA_3ggu-a1-m1-cB
35 2p3c-a1-m1-cB 98 99 0.7172 0.7245 0.7172 2.61e-50 2p3c-a1-m1-cA_2p3c-a1-m1-cB
36 2p3c-a1-m1-cA 98 99 0.7172 0.7245 0.7172 2.61e-50 2p3c-a1-m1-cA_2p3c-a1-m1-cB
37 3mws-a1-m1-cB 99 99 0.6970 0.6970 0.6970 2.07e-49 3mws-a1-m1-cA_3mws-a1-m1-cB
38 3mws-a1-m1-cA 99 99 0.6970 0.6970 0.6970 2.07e-49 3mws-a1-m1-cA_3mws-a1-m1-cB
39 6p9a-a1-m1-cB 99 99 0.6869 0.6869 0.6869 2.29e-49 6p9a-a1-m1-cA_6p9a-a1-m1-cB
40 6p9a-a1-m1-cA 99 99 0.6869 0.6869 0.6869 2.29e-49 6p9a-a1-m1-cA_6p9a-a1-m1-cB
41 2b7z-a1-m1-cB 99 99 0.7778 0.7778 0.7778 1.19e-48 2b7z-a1-m1-cA_2b7z-a1-m1-cB
42 2b7z-a1-m1-cA 99 99 0.7778 0.7778 0.7778 1.19e-48 2b7z-a1-m1-cA_2b7z-a1-m1-cB
43 2azc-a2-m2-cB 99 99 0.7273 0.7273 0.7273 7.57e-48 2azc-a2-m1-cA_2azc-a2-m2-cB
44 2azc-a2-m2-cA 99 99 0.7273 0.7273 0.7273 7.57e-48 2azc-a2-m1-cA_2azc-a2-m2-cA
45 2azc-a2-m1-cA 99 99 0.7273 0.7273 0.7273 7.57e-48 2azc-a2-m1-cA_2azc-a2-m2-cA, 2azc-a2-m1-cA_2azc-a2-m2-cB
46 1k6c-a1-m1-cA 94 99 0.7374 0.7766 0.7374 9.14e-48 1k6c-a1-m1-cB_1k6c-a1-m1-cA
47 1k6c-a1-m1-cB 93 99 0.7273 0.7742 0.7273 5.25e-46 1k6c-a1-m1-cB_1k6c-a1-m1-cA
48 5b18-a2-m1-cD 99 99 0.6465 0.6465 0.6465 3.16e-43 5b18-a2-m1-cC_5b18-a2-m1-cD
49 5b18-a2-m1-cC 99 99 0.6465 0.6465 0.6465 3.16e-43 5b18-a2-m1-cC_5b18-a2-m1-cD
50 2sam-a1-m2-cA 99 99 0.4949 0.4949 0.4949 3.31e-35 2sam-a1-m1-cA_2sam-a1-m2-cA
51 2sam-a1-m1-cA 99 99 0.4949 0.4949 0.4949 3.31e-35 2sam-a1-m1-cA_2sam-a1-m2-cA
52 1bai-a1-m1-cB 124 91 0.3535 0.2823 0.3846 5.17e-08 1bai-a1-m1-cA_1bai-a1-m1-cB
53 1bai-a1-m1-cA 124 91 0.3535 0.2823 0.3846 5.17e-08 1bai-a1-m1-cA_1bai-a1-m1-cB
54 6s1w-a1-m1-cB 108 96 0.2828 0.2593 0.2917 4.03e-04 6s1w-a1-m1-cA_6s1w-a1-m1-cB
55 7bgt-a1-m1-cB 108 96 0.2828 0.2593 0.2917 4.52e-04 7bgt-a1-m1-cA_7bgt-a1-m1-cB
56 7bgt-a1-m1-cA 108 96 0.2828 0.2593 0.2917 4.52e-04 7bgt-a1-m1-cA_7bgt-a1-m1-cB
57 3nr6-a2-m4-cA 120 96 0.2222 0.1833 0.2292 0.001 3nr6-a2-m4-cB_3nr6-a2-m4-cA
58 3nr6-a2-m4-cB 114 93 0.2626 0.2281 0.2796 0.004 3nr6-a2-m2-cB_3nr6-a2-m4-cB, 3nr6-a2-m4-cB_3nr6-a2-m4-cA
59 3nr6-a2-m2-cB 114 93 0.2626 0.2281 0.2796 0.004 3nr6-a2-m2-cB_3nr6-a2-m4-cB
60 2hah-a1-m2-cA 112 106 0.3636 0.3214 0.3396 0.004 2hah-a1-m1-cA_2hah-a1-m2-cA
61 2hah-a1-m1-cA 112 106 0.3636 0.3214 0.3396 0.004 2hah-a1-m1-cA_2hah-a1-m2-cA
62 6s1w-a1-m1-cA 97 92 0.2323 0.2371 0.2500 0.014 6s1w-a1-m1-cA_6s1w-a1-m1-cB
63 6fiv-a1-m2-cA 112 66 0.2121 0.1875 0.3182 0.023 6fiv-a1-m1-cA_6fiv-a1-m2-cA
64 6fiv-a1-m1-cA 112 66 0.2121 0.1875 0.3182 0.023 6fiv-a1-m1-cA_6fiv-a1-m2-cA
65 2fmb-a1-m2-cA 104 99 0.2626 0.2500 0.2626 0.047 2fmb-a1-m1-cA_2fmb-a1-m2-cA
66 2fmb-a1-m1-cA 104 99 0.2626 0.2500 0.2626 0.047 2fmb-a1-m1-cA_2fmb-a1-m2-cA
67 3f1c-a1-m1-cA 229 30 0.1616 0.0699 0.5333 0.057 3f1c-a1-m1-cA_3f1c-a1-m1-cB
68 3f1c-a1-m1-cB 230 30 0.1616 0.0696 0.5333 0.057 3f1c-a1-m1-cA_3f1c-a1-m1-cB
69 2rsp-a1-m1-cA 115 31 0.1515 0.1304 0.4839 0.39 2rsp-a1-m1-cB_2rsp-a1-m1-cA
70 4jis-a1-m1-cA 221 30 0.1515 0.0679 0.5000 1.1 4jis-a1-m1-cB_4jis-a1-m1-cA
71 4jis-a1-m1-cB 219 30 0.1515 0.0685 0.5000 1.1 4jis-a1-m1-cB_4jis-a1-m1-cA
72 2rsp-a1-m1-cB 113 23 0.1212 0.1062 0.5217 1.7 2rsp-a1-m1-cB_2rsp-a1-m1-cA
73 7ed2-a1-m1-cB 221 32 0.1010 0.0452 0.3125 2.3 7ed2-a1-m1-cA_7ed2-a1-m1-cB
74 7ed2-a1-m1-cA 221 32 0.1010 0.0452 0.3125 2.3 7ed2-a1-m1-cA_7ed2-a1-m1-cB
75 1ylm-a1-m1-cB 139 42 0.1818 0.1295 0.4286 5.8 1ylm-a1-m1-cA_1ylm-a1-m1-cB
76 1ylm-a1-m1-cA 139 42 0.1818 0.1295 0.4286 5.8 1ylm-a1-m1-cA_1ylm-a1-m1-cB
77 4w9n-a3-m1-cB 311 52 0.1717 0.0547 0.3269 6.2 4w9n-a3-m1-cD_4w9n-a3-m1-cB
78 4w9n-a3-m1-cA 323 52 0.1717 0.0526 0.3269 6.2 4w9n-a3-m1-cD_4w9n-a3-m1-cA
79 4w9n-a3-m1-cD 310 52 0.1717 0.0548 0.3269 6.8 4w9n-a3-m1-cD_4w9n-a3-m1-cA, 4w9n-a3-m1-cD_4w9n-a3-m1-cB
80 8eyk-a1-m1-cF 1070 52 0.1717 0.0159 0.3269 7.0 8eyk-a1-m1-cE_8eyk-a1-m1-cF
81 8eyk-a1-m1-cE 966 52 0.1717 0.0176 0.3269 8.0 8eyk-a1-m1-cE_8eyk-a1-m1-cF
82 2uxq-a1-m1-cB 401 74 0.1919 0.0474 0.2568 9.3 2uxq-a1-m1-cB_2uxq-a1-m1-cA
83 2uxq-a1-m1-cA 402 74 0.1919 0.0473 0.2568 9.3 2uxq-a1-m1-cB_2uxq-a1-m1-cA
84 3dem-a1-m1-cA 267 22 0.0909 0.0337 0.4091 9.8 3dem-a1-m1-cB_3dem-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600