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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
PQITLWKRPIITIKIGGQLKDVLMDTGADDTVLENIDLPGKWKPKLIGGIGGFVKVRQYD
HVPVEVAGHKVTTTVLVGPTPVDVIGRNLLTQIGATLNF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6p9a-a1-m1-cB 99 99 1.0000 1.0000 1.0000 2.43e-66 6p9a-a1-m1-cA_6p9a-a1-m1-cB
2 6p9a-a1-m1-cA 99 99 1.0000 1.0000 1.0000 2.43e-66 6p9a-a1-m1-cA_6p9a-a1-m1-cB
3 3oud-a1-m1-cA 99 99 0.7980 0.7980 0.7980 3.70e-56 3oud-a1-m1-cA_3oud-a1-m1-cB
4 1kj4-a3-m4-cD 99 99 0.7778 0.7778 0.7778 5.74e-56 1kj4-a3-m3-cA_1kj4-a3-m4-cD, 1kj4-a3-m4-cA_1kj4-a3-m4-cD
5 1kj4-a3-m4-cC 99 99 0.7778 0.7778 0.7778 5.74e-56 1kj4-a3-m2-cB_1kj4-a3-m4-cC
6 1kj4-a3-m4-cB 99 99 0.7778 0.7778 0.7778 5.74e-56 1kj4-a3-m2-cB_1kj4-a3-m4-cB
7 1kj4-a3-m4-cA 99 99 0.7778 0.7778 0.7778 5.74e-56 1kj4-a3-m4-cA_1kj4-a3-m4-cD
8 1kj4-a3-m3-cA 99 99 0.7778 0.7778 0.7778 5.74e-56 1kj4-a3-m3-cA_1kj4-a3-m4-cD
9 1kj4-a3-m2-cB 99 99 0.7778 0.7778 0.7778 5.74e-56 1kj4-a3-m2-cB_1kj4-a3-m4-cB, 1kj4-a3-m2-cB_1kj4-a3-m4-cC
10 3oud-a1-m1-cB 99 99 0.7879 0.7879 0.7879 1.27e-55 3oud-a1-m1-cA_3oud-a1-m1-cB
11 1mt9-a1-m1-cB 99 99 0.7677 0.7677 0.7677 1.58e-55 1mt9-a1-m1-cA_1mt9-a1-m1-cB
12 1mt9-a1-m1-cA 99 99 0.7677 0.7677 0.7677 1.58e-55 1mt9-a1-m1-cA_1mt9-a1-m1-cB
13 2f80-a2-m4-cB 99 99 0.7677 0.7677 0.7677 6.86e-55 2f80-a2-m1-cA_2f80-a2-m4-cB
14 2f80-a2-m1-cA 99 99 0.7677 0.7677 0.7677 6.86e-55 2f80-a2-m1-cA_2f80-a2-m4-cB
15 6ogt-a1-m2-cA 99 99 0.7374 0.7374 0.7374 1.60e-54 6ogt-a1-m1-cA_6ogt-a1-m2-cA
16 6ogt-a1-m1-cA 99 99 0.7374 0.7374 0.7374 1.60e-54 6ogt-a1-m1-cA_6ogt-a1-m2-cA
17 4mc2-a1-m1-cB 99 99 0.7576 0.7576 0.7576 2.37e-54 4mc2-a1-m1-cA_4mc2-a1-m1-cB
18 4mc2-a1-m1-cA 99 99 0.7576 0.7576 0.7576 2.37e-54 4mc2-a1-m1-cA_4mc2-a1-m1-cB
19 1ztz-a2-m2-cB 99 99 0.7576 0.7576 0.7576 2.37e-54 1ztz-a2-m1-cA_1ztz-a2-m2-cB, 1ztz-a2-m1-cB_1ztz-a2-m2-cB, 1ztz-a2-m2-cA_1ztz-a2-m2-cB
20 1ztz-a2-m2-cA 99 99 0.7576 0.7576 0.7576 2.37e-54 1ztz-a2-m2-cA_1ztz-a2-m2-cB
21 1ztz-a2-m1-cB 99 99 0.7576 0.7576 0.7576 2.37e-54 1ztz-a2-m1-cB_1ztz-a2-m2-cB
22 1ztz-a2-m1-cA 99 99 0.7576 0.7576 0.7576 2.37e-54 1ztz-a2-m1-cA_1ztz-a2-m2-cB
23 3ttp-a1-m1-cB 99 99 0.7071 0.7071 0.7071 1.33e-52 3ttp-a1-m1-cA_3ttp-a1-m1-cB
24 3ttp-a1-m1-cA 99 99 0.7071 0.7071 0.7071 1.33e-52 3ttp-a1-m1-cA_3ttp-a1-m1-cB
25 8dch-a1-m1-cB 99 99 0.7071 0.7071 0.7071 2.43e-52 8dch-a1-m1-cA_8dch-a1-m1-cB
26 8dch-a1-m1-cA 99 99 0.7071 0.7071 0.7071 2.43e-52 8dch-a1-m1-cA_8dch-a1-m1-cB
27 3ggu-a1-m1-cB 99 99 0.7273 0.7273 0.7273 2.68e-52 3ggu-a1-m1-cA_3ggu-a1-m1-cB
28 3ggu-a1-m1-cA 99 99 0.7273 0.7273 0.7273 2.68e-52 3ggu-a1-m1-cA_3ggu-a1-m1-cB
29 2p3c-a1-m1-cB 98 99 0.7576 0.7653 0.7576 3.78e-52 2p3c-a1-m1-cA_2p3c-a1-m1-cB
30 2p3c-a1-m1-cA 98 99 0.7576 0.7653 0.7576 3.78e-52 2p3c-a1-m1-cA_2p3c-a1-m1-cB
31 3u7s-a1-m1-cB 99 99 0.6768 0.6768 0.6768 7.28e-52 3u7s-a1-m1-cA_3u7s-a1-m1-cB
32 3u7s-a1-m1-cA 99 99 0.6768 0.6768 0.6768 7.28e-52 3u7s-a1-m1-cA_3u7s-a1-m1-cB
33 3mws-a1-m1-cB 99 99 0.7071 0.7071 0.7071 6.92e-50 3mws-a1-m1-cA_3mws-a1-m1-cB
34 3mws-a1-m1-cA 99 99 0.7071 0.7071 0.7071 6.92e-50 3mws-a1-m1-cA_3mws-a1-m1-cB
35 2p3d-a1-m1-cB 99 99 0.6970 0.6970 0.6970 9.72e-50 2p3d-a1-m1-cA_2p3d-a1-m1-cB
36 2p3d-a1-m1-cA 99 99 0.6970 0.6970 0.6970 9.72e-50 2p3d-a1-m1-cA_2p3d-a1-m1-cB
37 3t3c-a1-m1-cB 99 99 0.6869 0.6869 0.6869 2.29e-49 3t3c-a1-m1-cA_3t3c-a1-m1-cB
38 3t3c-a1-m1-cA 99 99 0.6869 0.6869 0.6869 2.29e-49 3t3c-a1-m1-cA_3t3c-a1-m1-cB
39 2rkg-a1-m1-cB 100 100 0.7071 0.7000 0.7000 3.00e-49 2rkg-a1-m1-cA_2rkg-a1-m1-cB
40 2rkg-a1-m1-cA 100 100 0.7071 0.7000 0.7000 3.00e-49 2rkg-a1-m1-cA_2rkg-a1-m1-cB
41 2azc-a2-m2-cB 99 99 0.7475 0.7475 0.7475 9.43e-48 2azc-a2-m1-cA_2azc-a2-m2-cB
42 2azc-a2-m2-cA 99 99 0.7475 0.7475 0.7475 9.43e-48 2azc-a2-m1-cA_2azc-a2-m2-cA
43 2azc-a2-m1-cA 99 99 0.7475 0.7475 0.7475 9.43e-48 2azc-a2-m1-cA_2azc-a2-m2-cA, 2azc-a2-m1-cA_2azc-a2-m2-cB
44 1k6c-a1-m1-cA 94 99 0.7273 0.7660 0.7273 1.77e-47 1k6c-a1-m1-cB_1k6c-a1-m1-cA
45 2b7z-a1-m1-cB 99 99 0.7475 0.7475 0.7475 2.42e-47 2b7z-a1-m1-cA_2b7z-a1-m1-cB
46 2b7z-a1-m1-cA 99 99 0.7475 0.7475 0.7475 2.42e-47 2b7z-a1-m1-cA_2b7z-a1-m1-cB
47 1k6c-a1-m1-cB 93 99 0.7071 0.7527 0.7071 5.49e-46 1k6c-a1-m1-cB_1k6c-a1-m1-cA
48 5b18-a2-m1-cD 99 99 0.6566 0.6566 0.6566 1.89e-43 5b18-a2-m1-cC_5b18-a2-m1-cD
49 5b18-a2-m1-cC 99 99 0.6566 0.6566 0.6566 1.89e-43 5b18-a2-m1-cC_5b18-a2-m1-cD
50 2sam-a1-m2-cA 99 99 0.4848 0.4848 0.4848 3.60e-33 2sam-a1-m1-cA_2sam-a1-m2-cA
51 2sam-a1-m1-cA 99 99 0.4848 0.4848 0.4848 3.60e-33 2sam-a1-m1-cA_2sam-a1-m2-cA
52 3nr6-a2-m4-cB 114 93 0.3333 0.2895 0.3548 1.91e-06 3nr6-a2-m2-cB_3nr6-a2-m4-cB, 3nr6-a2-m4-cB_3nr6-a2-m4-cA
53 3nr6-a2-m2-cB 114 93 0.3333 0.2895 0.3548 1.91e-06 3nr6-a2-m2-cB_3nr6-a2-m4-cB
54 3nr6-a2-m4-cA 120 93 0.3333 0.2750 0.3548 4.33e-06 3nr6-a2-m4-cB_3nr6-a2-m4-cA
55 1bai-a1-m1-cB 124 89 0.3232 0.2581 0.3596 4.91e-05 1bai-a1-m1-cA_1bai-a1-m1-cB
56 1bai-a1-m1-cA 124 89 0.3232 0.2581 0.3596 4.91e-05 1bai-a1-m1-cA_1bai-a1-m1-cB
57 2fmb-a1-m2-cA 104 99 0.3232 0.3077 0.3232 3.35e-04 2fmb-a1-m1-cA_2fmb-a1-m2-cA
58 2fmb-a1-m1-cA 104 99 0.3232 0.3077 0.3232 3.35e-04 2fmb-a1-m1-cA_2fmb-a1-m2-cA
59 2hah-a1-m2-cA 112 106 0.3737 0.3304 0.3491 7.04e-04 2hah-a1-m1-cA_2hah-a1-m2-cA
60 2hah-a1-m1-cA 112 106 0.3737 0.3304 0.3491 7.04e-04 2hah-a1-m1-cA_2hah-a1-m2-cA
61 6fiv-a1-m2-cA 112 84 0.2828 0.2500 0.3333 7.27e-04 6fiv-a1-m1-cA_6fiv-a1-m2-cA
62 6fiv-a1-m1-cA 112 84 0.2828 0.2500 0.3333 7.27e-04 6fiv-a1-m1-cA_6fiv-a1-m2-cA
63 6s1w-a1-m1-cB 108 96 0.2525 0.2315 0.2604 0.81 6s1w-a1-m1-cA_6s1w-a1-m1-cB
64 7bgt-a1-m1-cB 108 96 0.2525 0.2315 0.2604 0.83 7bgt-a1-m1-cA_7bgt-a1-m1-cB
65 7bgt-a1-m1-cA 108 96 0.2525 0.2315 0.2604 0.83 7bgt-a1-m1-cA_7bgt-a1-m1-cB
66 6s1w-a1-m1-cA 97 92 0.2121 0.2165 0.2283 1.9 6s1w-a1-m1-cA_6s1w-a1-m1-cB
67 3f1c-a1-m1-cA 229 30 0.1313 0.0568 0.4333 2.5 3f1c-a1-m1-cA_3f1c-a1-m1-cB
68 3f1c-a1-m1-cB 230 30 0.1313 0.0565 0.4333 2.5 3f1c-a1-m1-cA_3f1c-a1-m1-cB
69 3c8v-a2-m1-cC 455 53 0.1818 0.0396 0.3396 3.4 3c8v-a2-m1-cD_3c8v-a2-m1-cC
70 6w4u-a1-m1-cA 252 41 0.1313 0.0516 0.3171 5.2 6w4u-a1-m1-cA_6w4u-a1-m1-cB
71 6w4u-a1-m1-cB 253 41 0.1313 0.0514 0.3171 5.2 6w4u-a1-m1-cA_6w4u-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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